| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2166 |
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| Symbol | |
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| ID | 4270945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2461026 |
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| End bp | 2462309 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638126922 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_742998 |
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| Protein GI | 114321315 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0862799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGAGG GCGCGGTAAC CGGGAAACGG CCGCTCTGGC GCTGGGCCCT GGCCCGGCTC
TGGCATGGTC CGGATCGCGC AGCCGGCGCT TCGGCACCGG CCTGGTCGGG TGGCATCGGC
GGCTTGGAGC CGGCGGAGGA CGCAAGGGTG GCCCGGCGGA TCGGGCGTTT TATCGGTCTG
GTGGGCCTGT TTGTGGGTGC CTTTGTCGTC TGGGCCTATT GGGCGGAACT GGCCGAGGTC
TCCAGTGGCC AGGCGACGGT GGTACCCAGC CGCGGCACCC AGGTGATCCA GTCCCTGGAG
GGCGGGATCC TCCAGGAGCT GCTGGTGGCC GAGGGGGAGA TGGTGGAGCC GGGGCAACCG
CTGGCGCGCC TGGACCCGAC CCGCACCCAG GCCGACATGG ACGAGGTGAT CGCCCGCTAC
CAGGGGGCGC TGGCGCGAAA GGCGCGGCTG GAGGCGGAAC TGGCCGGTGA GGGCGAGATC
CGGTTTCCCG AAGAGCTGGA CCTCGCCTCG GAGGTGGTGG CCGCCGAGCG AACCCTGTTC
GAGGCGCGCC GTGCGCATCT GGAGCGCACT GAGCAGGACA TCCGGACATC GCTGCAGCTG
GTCGGTAACG AACGCTCGAT CACCGAGGAG CTGGTCCGTG CGGGTGCGGC GAGCGAGGTG
GAGTTGCTGC AGCTGCGCCG CTCCGAGGCG GATTTGCGCC GGGAGTTGAA TCAATTGCGT
AACGAGTTCC GGGTGCGCGC GCGCCAGGAC CTGGCAGAGA CCCGCACCGA GGTGGAGGCG
TTGCGCTCCA GCCTGCGCGG TCACGAGGAC ACCCGTCAGC GCCAGACCCT GCGCTCGCCG
GTGCGCGGCC GGGTGCAGAA CCTGGCGGTC ACCACCATCG GCGGCGTGCT GGCTCCCAAC
GGCGAGTTGA TGGAGATCGT GCCCCAGGAC GGGGAGTTGC GGATCGAGGC CCGCATCTCG
CCCCGGGACA TCGCCTACAT CCACCCCGGT CAGCGCGCCC AGGTGAAGAT CACGGCCTAC
GATTACGCTA TCTACGGCGG CTTGGAGGGC GAGGTGGTGA ACATCTCACC CGATACCGAG
CGCGACGAGA TCAACCCCGA GGAGGTCTAT TACAAGGTCT TCATTCACAC CGACAGCGAT
GAGCTGGTGG TGGAGAACGG TCAGCGTTTC CCCATCTCCC CCGGCATGGT GGCGGAGGTG
GATATCGAGA CCGGCCAGCG CACGGTCTTG CAGTATATTA TAAAGCCCTT TAACCGGGCG
CGGGAGGCCT TGCGGGAGCG GTGA
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| Protein sequence | MHEGAVTGKR PLWRWALARL WHGPDRAAGA SAPAWSGGIG GLEPAEDARV ARRIGRFIGL
VGLFVGAFVV WAYWAELAEV SSGQATVVPS RGTQVIQSLE GGILQELLVA EGEMVEPGQP
LARLDPTRTQ ADMDEVIARY QGALARKARL EAELAGEGEI RFPEELDLAS EVVAAERTLF
EARRAHLERT EQDIRTSLQL VGNERSITEE LVRAGAASEV ELLQLRRSEA DLRRELNQLR
NEFRVRARQD LAETRTEVEA LRSSLRGHED TRQRQTLRSP VRGRVQNLAV TTIGGVLAPN
GELMEIVPQD GELRIEARIS PRDIAYIHPG QRAQVKITAY DYAIYGGLEG EVVNISPDTE
RDEINPEEVY YKVFIHTDSD ELVVENGQRF PISPGMVAEV DIETGQRTVL QYIIKPFNRA
REALRER
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