| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2150 |
|---|
| Symbol | |
|---|
| ID | 4270145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 2445306 |
|---|
| End bp | 2445866 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638126906 |
|---|
| Product | peptidase C39, bacteriocin processing |
|---|
| Protein accession | YP_742982 |
|---|
| Protein GI | 114321299 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.649783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0669823 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCTGC TCAAACATCG GTCCTTCAAC CGCGCGCAGG CCGGCCGGGA TTTCAGCCGG
GTCATTCCCC AGTCCCGCCC TGACTCCTGC GGTCTGGCCG CCCTGGCCAC CCTGATGAAT
GAGGTCCTAC ACTTACCGAC GAGCGAAGCC GCGCTGCAGG CGAGACTGAA ACACCGCCGC
CCCGCCAGCC TGACTGACCT GAGCAAGCTT AGTCGCCAGG CAGGCCTCAA GGCCCATGCC
TACGCGGTCG ACCTGGACCT GCTCCTTCGG GTGCAACGAC CGGCCATACT GCATATGGGG
GCCTCGCGCC GGATCGGGCA CTACGTGGTG GTCCGGGGGG TTGCGGACGA CAAAGCGTGG
CTCGCCGATC CCATGCGCGG CAACGTCCAC CTGGACCTGA CCGCCCTCAA GAAACACTGG
TACGTGCCTC GCAAACCCTT TGGTCACGTC CTTTACGTCG CCGGAGCGGA CGAGGAATGG
TTACCCCTGA ACGAGGAGCA CCTTCCGGGC AGCCCGCCGG AAACGGTCAG CGACTGGTTC
CCCCCGCCGG CCGGACGTTA G
|
|---|
| Protein sequence | MTLLKHRSFN RAQAGRDFSR VIPQSRPDSC GLAALATLMN EVLHLPTSEA ALQARLKHRR
PASLTDLSKL SRQAGLKAHA YAVDLDLLLR VQRPAILHMG ASRRIGHYVV VRGVADDKAW
LADPMRGNVH LDLTALKKHW YVPRKPFGHV LYVAGADEEW LPLNEEHLPG SPPETVSDWF
PPPAGR
|
|---|
| |