Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2128 |
Symbol | fadE |
ID | 4269378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 2420742 |
End bp | 2423066 |
Gene Length | 2325 bp |
Protein Length | 774 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638126884 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_742960 |
Protein GI | 114321277 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0257482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.562441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAGCT ACCTCATCGC GGTTGCGGTG CTACTGGTGC TGGCGCTGCT GTGGCTGGCG CCGCTGCGCC GTTCGCTGCT CAGCGCCCCG GTCATGGGCC TGCTCCGGCA GCGGCTGCCG TCAATCTCCG CCACTGAGCG GGAGGCGCTG GAGGCGGGCG ATACCTGGTG GGATGCGCAG CTCTTCACCG GCCGGCCGGA CTGGGCGGTG CTGCGCTCGC TGCCCCCGGC GCGGCTGAGC GAGGCGGAGC AGGCCTTTCT CGACGGGCCG GTGGAGGCGC TCTGCCGCAT GCTCGACGCC TGGGAGGTGA ACGAGCAGCG GGACCTCCCG GAGCCGGTCT GGCGCTTTAT CCGCGATCAG GGCTTGCTCG GGATGATCAT CCCCCGGGCC TATGGCGGCC TGGGGTTCTC CGCCGCCGCC CACTCCCAGG TGGTGATGAA GGTGGGCGCG CGTGAGGGCA CCGCCGGGGT CACGGTCTCG GTGCCCAACT CGCTGGGCCC GGCGGAGCTG TTGCTGCGCT ACGGGACGGA GGCACAGCGC AACCACTATC TGCCGCGCCT GGCCCGGGGG GAGGAGATCC CCTGTTTTGC CCTCACCGGG CCCACCGCCG GCTCCGATGC GGCCTCCATC CCCGATCGTG GGGTGGTCTG TTACGGCGAC TACCGCGGAG AGCGGGTGCT GGGCATGCGC GTGAGTTGGG ACAAGCGCTA CATCACCCTG GCCCCCGTGG CCACGGTGCT GGGCCTGGCC TTCCGGCTGG AGGATCCGGA CGAGCTGTTG GGCCGGGGTC CGGTGCCCGG GATCACCGTG GCACTGATCC CCACCGATCA CCCCGGCGTG GAGATCGGCC GACGCCATTT CCCGGCCGGG GTGGCCTTCC AGAACGGCCC CACCCGCGGG CGCGATGTCT TCATCCCCCT GGATTTCATC ATCGGCGGGC CGCCGCGCGC CGGCCAGGGT TGGCGCATGT TGATGGGCTG TCTCGCCGCG GGGCGCTCGA TCTCGCTGCC GGCCGCCGGC GTGGGCAACG CCAAGCTGGC GGCGCGCACC GCTGGCGCCT ACGCCCGGGT GCGCCGCCAG TTCAATACCC CGGTGGGCCG CTTCGAGGGG GTGCAGGAGG CGCTGACGCG CATTGCCGGC CAGGCCTATC GCCTGGACGC CGGCCGCTGG GTCACCACCG CCGCCCTGGA TGCCGGCATC GAGCCGGCGG TGATCTCGGC CATTCTCAAA TACCAGGCCA CCGCCGGCGG CCGCGAGGCC ATCACCGACG CCATGGATGT GCATGGCGGC AAGGCCATCT GCACCGGCCC GTCCAACACC CTCTTCGGGG CCTACCAGGC CCTGCCGGTG GGGATCACCG TGGAGGGGGC CAACATCCTG ACCCGCAGCA TGATCGTCTT CGGGCAGGGG GCCCTGCGCT GCCACCCGTG GCTGCTGCGG GAGGTGCAGA CCGCCCAGGC GGGGGACCTG ACGGGCTTCG ACCGCGCCTT CTGGGGCCAC GTGCGCCACC TGCTCGCCAA CCTGGGTCGG GTGGCCCTCC ACAACGCCAC CGGCGGTCGC CTGGCCAGTG CCCCCGGCGC CGGTGCGTTG GATCGCTGGT ACCGCCAGCT CGCACGCGAG TCGGCCAATT TTGCCCTGGT TGCGGATGCC GCGCTGCTGA TCCTCGGCGG CGAGCTGAAG CGGCGCGAGC GCCTCTCCGG CCGGCTGGCG GACGTCCTCA GTGAGCTCTA CCTGATGAGC TGTGCGTTGA AACAGCACGA GGACGACGGC TGTCCGATCG CCGACCGGCC CCTGCTGGAC TGGGTCTGCC AGGAGGGGCT CTACCGCATC CAGGAGCGGT TGGACCGGGT TCTGGCCAAC CTGCCGGTGC GCCCGGCGGC GTTCCTGCTG CGGCGGTTGC TCTTCCCCTG GGGCCGGCGC CGGCGCCCCG CGGACGACCG CCTGGGTCGC CGCGTGGCCG AGACCCTGTT GGAACCGGGC GAGGTGCGGG ACCGGCTCAC GGCAGGGCTG TACCTGAGTC GGGATCGCGA CGACGCCACC GGCGCCCTGG AGTGGGCCCT GCGCGAGGTG GTGGCCACCG AGGACCTGGA GCAACGCCTG CGCCAGGCGG TGCGCGACGG CCGTCTGCCC GATCTCGACG GTGCCGCGCT CCACCAGGCG GCGCTGGACG CGGGGGGGAT CAGCGAACCG GACCACCGCC GGCTGCGAGC GGCCCACCAA GCGGTGATGC GGGTGATCCA GGTGGACGAA TTCGAGGCCG CGGACCTGTC CCGGCCCGGA AAAGTGCCGC GACCGGCACA GCGGTGTCAA TCAGAGGCTG CCTGA
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Protein sequence | MLSYLIAVAV LLVLALLWLA PLRRSLLSAP VMGLLRQRLP SISATEREAL EAGDTWWDAQ LFTGRPDWAV LRSLPPARLS EAEQAFLDGP VEALCRMLDA WEVNEQRDLP EPVWRFIRDQ GLLGMIIPRA YGGLGFSAAA HSQVVMKVGA REGTAGVTVS VPNSLGPAEL LLRYGTEAQR NHYLPRLARG EEIPCFALTG PTAGSDAASI PDRGVVCYGD YRGERVLGMR VSWDKRYITL APVATVLGLA FRLEDPDELL GRGPVPGITV ALIPTDHPGV EIGRRHFPAG VAFQNGPTRG RDVFIPLDFI IGGPPRAGQG WRMLMGCLAA GRSISLPAAG VGNAKLAART AGAYARVRRQ FNTPVGRFEG VQEALTRIAG QAYRLDAGRW VTTAALDAGI EPAVISAILK YQATAGGREA ITDAMDVHGG KAICTGPSNT LFGAYQALPV GITVEGANIL TRSMIVFGQG ALRCHPWLLR EVQTAQAGDL TGFDRAFWGH VRHLLANLGR VALHNATGGR LASAPGAGAL DRWYRQLARE SANFALVADA ALLILGGELK RRERLSGRLA DVLSELYLMS CALKQHEDDG CPIADRPLLD WVCQEGLYRI QERLDRVLAN LPVRPAAFLL RRLLFPWGRR RRPADDRLGR RVAETLLEPG EVRDRLTAGL YLSRDRDDAT GALEWALREV VATEDLEQRL RQAVRDGRLP DLDGAALHQA ALDAGGISEP DHRRLRAAHQ AVMRVIQVDE FEAADLSRPG KVPRPAQRCQ SEAA
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