| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1946 |
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| Symbol | truB |
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| ID | 4268114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2213362 |
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| End bp | 2214288 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638126700 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_742778 |
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| Protein GI | 114321095 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0313874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTA AGCATCTGCG CCGGGTCAAC GGCATCCTGC TGCTGGACAA ACCCGCCGGG
CTGTCCTCCA ACCAGGCCCT GCAACGGGCG AAACGGCTGT TCCAGGCCCG TAAGGCCGGT
CATACCGGCA GTCTGGACCC GCTGGCCACC GGCCTGCTGC CCCTCTGTTT CGGTGAGGCC
ACCAAGGTCT CCGGCTTTCT GCTGGACGCC GACAAGCACT ACCAAGTGCG CTGCCGCCTG
GGCGTCACCA CCGATACCGG CGATGCCGAG GGTGAGGTGC TGGAGGAGAC CCCGGTGCCG
GCACTGGACG CGGACCGGGT GGAGGCGGCA CTGGCCGGAT TCCGGGGCGA CATCGAGCAG
GTGCCGCCCA TGTACTCCGC GCTCAAGCAC AAGGGCCAGC GGCTTTACAA GCTGGCGCGT
GAGGGTAAAG AAGTCAATCG CGAGCCGCGC CCGGTGCGCA TCAATGGGCT CACGCTGGTG
GCGCTGGAGG GTGACACCCT GGCCCTGGAT GTCCGCTGCT CCAAGGGCAC CTACGTGCGC
ACCCTGGTCG AGGACATCGG CCGGGCGTTG GGCTGCGGAG CCCACGTCAT CGGCCTGCGC
CGCACCGGGC TGGGTCCGTT CGACGATCCC GACATGTTCA CGCTGGAGGC GCTGGAGGCC
GCGGCCGGAG AGGGCCTCGA GGCACTGGAC AACTGCCTGC TGCCGATGGA CAGCGCCCTT
GTGCAGTGGC CGGCCGTGGA GCTGGCCGAG GACGTCGCCT TCTTTCTCAT GCAGGGGCAG
CCGGTGTGGG TGCCCCGCAT TCCGGAGGCC GCCTGGTTGC GGCTCTATAC CCGCGAGGGC
CGTTTCCTGG GCATGGGCTG CCCGGATGCG GAGGGCCGCA TCGCGCCCAA ACGCCTGCTG
GCAACGGGCG GGGGCGGTAA GCAGTAA
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| Protein sequence | MARKHLRRVN GILLLDKPAG LSSNQALQRA KRLFQARKAG HTGSLDPLAT GLLPLCFGEA
TKVSGFLLDA DKHYQVRCRL GVTTDTGDAE GEVLEETPVP ALDADRVEAA LAGFRGDIEQ
VPPMYSALKH KGQRLYKLAR EGKEVNREPR PVRINGLTLV ALEGDTLALD VRCSKGTYVR
TLVEDIGRAL GCGAHVIGLR RTGLGPFDDP DMFTLEALEA AAGEGLEALD NCLLPMDSAL
VQWPAVELAE DVAFFLMQGQ PVWVPRIPEA AWLRLYTREG RFLGMGCPDA EGRIAPKRLL
ATGGGGKQ
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