Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_1944 |
Symbol | |
ID | 4268112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 2210799 |
End bp | 2212961 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638126698 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_742776 |
Protein GI | 114321093 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0229407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCGGG TGTCCCGCAG GGGCGGGGCA CCTCGTCAGT CATTTCAAGA GCAGCCGGAT ATTATCGTGA AATCAGTCAA GAAGAGCTTT CAGTACGGAA ACCACACGGT CACTCTGGAA ACCGGTGGCG TCGCACGGCA GGCCGATGGC GCCGTGCTGG TCAACATGAG TGATACGGTG GTGCTCGTCA CCGCTGTCGG TCGCAAGGAG GCGGACCCGG GCAAGGGCTT CTTCCCCCTG ACCGTCAATT ACCAGGAGCG GACCTATGCG GCGGGCAAGA TCCCGGGAGG CTTCTTCAAG CGTGAGGGCC GCCCCTCCGA GAAGGAGACC CTCACCTGCC GTCTGATCGA CCGGCCCATC CGGCCGCTGT TCCCGGAGGG GTTCTATAAC GAGGTGCAGG TGGTGGCCAC CGTGCTCTCC ATGAACCCTG AGGTGGATGC CGACATCCCG GCATTGATCG GGGCCTCCGC GGCACTGTCT ATTTCCGGTA TCCCCTTCGA TGGCCCCATC GGCGCCGCCC GTGTTGGCTA TAAGGACGGC GAGTACCTGC TGAATCCCAC CTTCGAGGAG ACCGCCGCCT CCGACCTGGA CCTGGTGGTC GCGGGCACGG AGAACGCCGT GCTGATGGTG GAGTCGGAGG CCAACCAGCT CCCCGAGGAG GCCATGCTTG GCGCCGTGCT GTACGGCCAC GAGCAGATGC AGGTGGCTAT CCAGGCGATC AACGAGCTCA CCGCCGAGGC GGGCAAGCCG CGATGGGACT GGCACCCGCC GCAAGGCGAC GCTGCCCTGG AGACGGCGAT CAAGGACCTG GTGGGCGACG ACCTGGCCGC CGCCTACCAG ATCCCGGAAA AGCAGGAGCG CCAGAACCGG ATCGGCGAAC TGCGGCAGCG GGCCGTCGAG GCGCTGGGTG AGAACCGTGA GGAAGAGGGC GGTTGGCCCG AGAAGGACGT GGGCGACGCC TTTAAGGGGC TGGAGAAGGA CATCGTCCGC GGGCGCATCC TGGCGGGTGA GCGCCGTATC GACGGGCGGG ATACCCGGAC CGTCCGGCCC ATCGACATCG AGGTGGGGAG CCTGCCGCGT ACGCACGGTT CGGCGATCTT TACCCGCGGC GAGACCCAGG CTGTGGTGGT GACCACCCTC GGGACCGGCC GTGATGCCCA GATCATCGAT GCCATCGAGG GCGAGCGCAA AGAGCAGTTC ATGCTGCACT ACAACTTCCC GCCCTACTGT GTGGGCGAGA CCGGCTTCAT GGGCACGCCC AAGCGCCGCG AGATCGGTCA CGGTAAGCTC GCCAAGCGGG GCATTGAAGC GGTCATGCCG GCCGCGGACG ATTGCCCCTA CGTGATCCGC GTGGTCTCCG AGATCACCGA GTCCAACGGC TCCTCCTCCA TGGCCACCGT CTGCGGCACC TCCCTGTCGC TGATGGACGC CGGCGTGCCA GTGAAAGCAC CGGTGGCCGG TATCGCCATG GGCCTGATCA AGGAGGACGA GCAGTTCGCC GTGCTCTCCG ACATCCTCGG CGATGAGGAC CACCTGGGCG ACATGGACTT CAAGGTCGCC GGGACCGAGA GCGGCGTGAC CGCGCTGCAG ATGGACATCA AGATCCAGGG GATTACCCGC GAGATCATGG AGCAGGCGCT GGAGCAGGCC CGGGAAGGCC GCCTGCACAT CCTTGGTGAG ATGAACAATG CCATCAGCGG CCCGCGGAGC GAGATGTCCG AGTACGCTCC GCGCCTGCTC ACCATCCGGA TCGACCCGGA CAAGATCCGT GATGTCATCG GCAAGGGTGG CGCCACCATT CGCGCGTTGA CCGAGGAGAC CGGCACCACT ATCGACATCT CCGACGATGG CAAGGTGACC ATCGCCTCCG CGGACAAGGC CGCGGCCGAC GAGGCCCGCC GGCGCATCGA GCTGCTCACC GCCGACGTGG AGGTGGGGAC GGTCTACGAG GGGAAGGTCT CGAAGCTGAT GGATTTCGGC GCCTTCGTCA ACATCCTGCC CGGCCGGGAT GGCCTGGTGC ACATCTCCCA GATCTCCAAC GAGCGCGTGG AGCGGGTGGG TGACTACCTC AAGGAAGGTG ACACCGTGCG CGTCAAGGTG CTGGAGGTGG ACCGCCAGGG CCGTATCCGG CTGAGCATGA AGGCGGTGCA GGACGGCGAG TGA
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Protein sequence | MRRVSRRGGA PRQSFQEQPD IIVKSVKKSF QYGNHTVTLE TGGVARQADG AVLVNMSDTV VLVTAVGRKE ADPGKGFFPL TVNYQERTYA AGKIPGGFFK REGRPSEKET LTCRLIDRPI RPLFPEGFYN EVQVVATVLS MNPEVDADIP ALIGASAALS ISGIPFDGPI GAARVGYKDG EYLLNPTFEE TAASDLDLVV AGTENAVLMV ESEANQLPEE AMLGAVLYGH EQMQVAIQAI NELTAEAGKP RWDWHPPQGD AALETAIKDL VGDDLAAAYQ IPEKQERQNR IGELRQRAVE ALGENREEEG GWPEKDVGDA FKGLEKDIVR GRILAGERRI DGRDTRTVRP IDIEVGSLPR THGSAIFTRG ETQAVVVTTL GTGRDAQIID AIEGERKEQF MLHYNFPPYC VGETGFMGTP KRREIGHGKL AKRGIEAVMP AADDCPYVIR VVSEITESNG SSSMATVCGT SLSLMDAGVP VKAPVAGIAM GLIKEDEQFA VLSDILGDED HLGDMDFKVA GTESGVTALQ MDIKIQGITR EIMEQALEQA REGRLHILGE MNNAISGPRS EMSEYAPRLL TIRIDPDKIR DVIGKGGATI RALTEETGTT IDISDDGKVT IASADKAAAD EARRRIELLT ADVEVGTVYE GKVSKLMDFG AFVNILPGRD GLVHISQISN ERVERVGDYL KEGDTVRVKV LEVDRQGRIR LSMKAVQDGE
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