Gene Mlg_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1939 
Symbol 
ID4270140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2205484 
End bp2206326 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content69% 
IMG OID638126693 
Productcytochrome c assembly protein 
Protein accessionYP_742771 
Protein GI114321088 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.664487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCCCCT GTTTCCCGGG GGCTGCCCGG AGACGCTTCA ACCTGACCAT GCTGTTGCTT 
ATCGCCATGC TGGCCGCCGC TCTCCACCTT CTGGCCGGCG GCCTGCTGTT CCTACGCCTG
ATCCACGGCA CCGCCCGGGT GACGGGCCGC GGCCTGCCCC TGGGGCTGGC GGCGGTGGCG
GCGCTGCTGC ACGCGGTCGT GGTCTGGTCG GCGGTGTGGA CACCGGTTGG GCTCAACCTG
GGCTTTTTCA ATGCCCTGGC GGTGGTCAGC CTGTTCATGG TGGTGGGCAT GCTGCTGGCC
ACCAGTCGCC TGCCGGTCTG CCACCTCGGT GTCATCCTGC TGCCGATCAG CGCCTTCAGT
GTGCTGATGG CCTGCACCCC CGACTGCGGC ACGGTGGTGC CGCGCGAGCC CGGGGTCGAC
CTGCACATCC TCACCTCCAT GCTCGGCTAC AGCACCCTGG CCCTGGCGGC CATTCAGGCG
CTGATCCTGG CCGCCCTGGA TTACCGCCTG CGGCACCGGC GCATGGGGGG CTTCGTGCGC
CGGCTGCCGG CACTCAACAC CATGGAGCAA CAGCTGTTCG GGATGCTCTG GCTGGGCTTC
GCGCTGCTCT CCGTGGGCCT GCTCACCGGC CTGGTGTTCG TGGATGACCT GCTGGCCCAG
CACCTGGTCC ACAAGACCAC GCTCTCGGTG GTCGCCTGGG TGGTCTTCGG CACGCTGCTG
GTGGGCCGCT GGCGGCTGGG CTGGCGGGGC CAGACCGCCG TGCGCTGGAC GCTCGGCGGC
TTCGCCGCAC TGATGCTGGC CTATTTCGGC AGCAAATTCG TGCTGGAATT GCTACTCGCC
TGA
 
Protein sequence
MPPCFPGAAR RRFNLTMLLL IAMLAAALHL LAGGLLFLRL IHGTARVTGR GLPLGLAAVA 
ALLHAVVVWS AVWTPVGLNL GFFNALAVVS LFMVVGMLLA TSRLPVCHLG VILLPISAFS
VLMACTPDCG TVVPREPGVD LHILTSMLGY STLALAAIQA LILAALDYRL RHRRMGGFVR
RLPALNTMEQ QLFGMLWLGF ALLSVGLLTG LVFVDDLLAQ HLVHKTTLSV VAWVVFGTLL
VGRWRLGWRG QTAVRWTLGG FAALMLAYFG SKFVLELLLA