| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1904 |
|---|
| Symbol | |
|---|
| ID | 4270104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 2171472 |
|---|
| End bp | 2173166 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638126660 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_742738 |
|---|
| Protein GI | 114321055 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGCC ACATCGATAT CCGCGACTTC GCCATCGTCG ACCAGCTCGA ACTGGACTTC
GGCGCCGGGA TGAACGTGCT CACCGGCGAG ACCGGGGCGG GCAAATCCAT CCTGCTCGAC
GCTCTGGGGC TCTGCCTGGG CGACCGCGCC GACAGCGGCA CCGTCCGCCC CGGGGCCAAG
CGGGCGGACC TCAGCGTCAG CTTCCGGCTC GCCCCCGACA GCCCCGTGCA CGACTGGCTG
GCCGAGCACG ACCTGGATGA GGACGGCGAC TGCATCCTCC GTCGCACCAT CCAGGAGAGC
GGCCGCACCC GCGGCTACAT CAACGGCCGC CCCGCCCCGC TCAACCTGCT CAAGGCCCTG
GGCGAGCAAC TGGTCGACAT CCACGGCCAG CACGCCCACC AGCTGCTGCT GCGCCGCCAC
GTCCAGCGCC GGATCCTGGA CGAGCACGCC GACGAGGGCG GCGCCCTGGA ACGGGTCCGC
TCGCTCCACC AGCAGCTGCG TGCGGTGGAC GAGGAGCTGC GCGCCTTGGA GGGCGACCGG
GAGAGCCACG AGGACCGCCT GGCGCTGCTG CGCTACCAAG TGGACGAGCT GGCCGCACTG
GAGCTGACGG TGGAGGGCAT CGAGGCGCTG GAGCAGGAAC AGAAGCGCCT GGCCAATGCC
GGCGCCCTGA TTCAGATGGC ACAGCAGATC CTCGACCCGC TCTACGACGA CGAGCAGTCC
GCGCAGGCCG CCCTGGGCCG CGCCAGCCGC GAACTGGACG GCCACGCCGG GCTGGACCCG
GCCCTGGACG AGGCCCGGGA GCTGTTCGGC AACGCCCTGG TGCAACTTGA GGAGGGCTGC
GATGCCCTGC GCCGGTTCGC CGACAACCTG GAGCTGGACC CGGAGCGCCT GGCCTGGGCC
GAGGAGCGAC TGGGCCAACT GAGCGACCTG GCGCGCAAGC ACCGCTGCCG TCCGGAGGCC
CTCCCCGAGC GGCTCGAGGC CCTGCAGGCG GAGCTCGCAG AGCTGGAGGG GGCCGGGGAG
CGGGTCCAGG CCCTGCGCGA GCAGCGCGCG GCCCTGCATC GCGACTACCG GGAGGCCGCC
GCCACGCTCA GTGAGCAACG CCAGGCCCAC GCCCGGGCCC TGGAGCAGCG GGTGGCCGGG
CTGCTGGAGG AGCTGAGCAT GGGCGGGGCC GAGCTCCAGA TCCAGGTGGC CTTCGACGCC
GAGGCCGAGC CCACCCCGCA CGGGCTGGAT CAGGTGGAGT TTCTGGTCCG CACCAACCCT
GGCCAAGCCT TCGGGCCGCT GGCCAAGGTG GCCTCCGGCG GCGAGCTGTC ACGGTTGGGG
CTGGCCCTGC AGGTCGCCAG CACCAAGGGC ACCGGCGCCC CCACCCTGAC CCTGGTCTTC
GACGAGGCGG ACAGCGGGAT CGGCGGTGCC GTGGCCGAGG TGGTCGGGCG CCTGCTGGCC
TCGCTGGGCC AACGCTACCA GGTGCTGTGC ATCACCCACC TGCCCCAGGT GGCCGCCCAG
GCCGGGTGCC ACTTTCAGGT CAGCAAGCAC AGCGAACGGG ACCGGACCCG CACCCGGGTC
ACCCCGCTCA CCGGCGAGCA GCGGATTCAG GAAGTGGCCC GAATGCTGGG CGGCGTGGAG
ATCAGTGATA ACACCCTGGC CTCGGCCCGG GAGATGCTGG AACGCGGCGC CGGCAGGCGC
CGGGAGACCG CCTGA
|
|---|
| Protein sequence | MLSHIDIRDF AIVDQLELDF GAGMNVLTGE TGAGKSILLD ALGLCLGDRA DSGTVRPGAK
RADLSVSFRL APDSPVHDWL AEHDLDEDGD CILRRTIQES GRTRGYINGR PAPLNLLKAL
GEQLVDIHGQ HAHQLLLRRH VQRRILDEHA DEGGALERVR SLHQQLRAVD EELRALEGDR
ESHEDRLALL RYQVDELAAL ELTVEGIEAL EQEQKRLANA GALIQMAQQI LDPLYDDEQS
AQAALGRASR ELDGHAGLDP ALDEARELFG NALVQLEEGC DALRRFADNL ELDPERLAWA
EERLGQLSDL ARKHRCRPEA LPERLEALQA ELAELEGAGE RVQALREQRA ALHRDYREAA
ATLSEQRQAH ARALEQRVAG LLEELSMGGA ELQIQVAFDA EAEPTPHGLD QVEFLVRTNP
GQAFGPLAKV ASGGELSRLG LALQVASTKG TGAPTLTLVF DEADSGIGGA VAEVVGRLLA
SLGQRYQVLC ITHLPQVAAQ AGCHFQVSKH SERDRTRTRV TPLTGEQRIQ EVARMLGGVE
ISDNTLASAR EMLERGAGRR RETA
|
|---|
| |