| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1868 |
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| Symbol | |
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| ID | 4268086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 2129487 |
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| End bp | 2130614 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638126624 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_742702 |
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| Protein GI | 114321019 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGA CACTGGAACT CGCCTCCGCA CTCATCGCCC GCCGCTCGGT GACGCCCATG
GACGCCGGCT GCCAGCAGTT GCTGGCGGAG CGATTGCGGC CCCTCGGTTT TGACTGTGAG
CGGCTGGATT ACGGCGAGGT GAACAATCTG TGGGCCCGGC GGGGTCAGCA GGGGCCGGTG
TTCTGTTTCG CCGGCCATAC CGATGTGGTG CCCCCGGGGC CGGAGGCCCA ATGGCGGCAC
CCACCCTTCC AGCCGGTGGT CGAGCAGGGG CTGCTCTACG GCCGCGGCGC GGCGGACATG
AAGGGCAGCG TCGCGGCCTT TGTCACCGCC CTGGAGCGCT ACCTGGCCGG CGGCCACCGG
CCGCGGGGTT CGCTCGCCCT GCTGATCACC AGCGACGAGG AGGGCCCGGC GGTGGACGGC
ACCCGGCACG TGGTCGAGAC CCTGTCCGAG CGCGGCGAGC GCATCGACTG GTGCCTGGTG
GGTGAGCCCT CCAGCACCGA ACGCGTGGGG GATGTGGTGA AGGTGGGCCG GCGCGGGTCG
CTCAACGGGC GGCTGACGGT GCGCGGCGAC CAGGGCCACG TGGCCTATCC CCATTTGGCG
CGCAATCCGG TGCACCAGGC GCTGGCCGCC CTGGATGAGC TGGTCACCAC CCGCTGGGAC
GAGGGCAACG ACCATTTCCC GCCCACCAGC TTCCAGATCT CCAACGTCCA AGCCGGCACC
GGCGCCACCA ACGTGATCCC CGGCGAGCTG GAGGTGACGT TCAATTTCCG CTTCTCCACC
GAGGTAACGG CGGATGAGTT ACAGCAGCGG GTAGAGGCGG TGCTGGACCG TCACGGCCTG
GACGGGCGGA TCGACTGGTC GCTCTCGGGC GAGCCCTTTC TGACCGCGGA GGGGGAGCTG
GTGGCCGCCA CCCAGGCGGC GGTCCGCGAT GTCTGCGGCG ACCCACCGGT GCTCTCCACT
TCCGGCGGCA CCTCAGACGG CCGCTTCATC GCCCCCACCG GGGCCCAGGT CCTGGAGCTG
GGGCCTGTGA ACGCCACCAT CCACAAGGTG AACGAGCACG TGCGGGCGGC GGATCTGGAC
ACGCTGTCAA GGATTTACGA GGGCGTCCTG CGCCGACTGC TCGGCTGA
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| Protein sequence | MSETLELASA LIARRSVTPM DAGCQQLLAE RLRPLGFDCE RLDYGEVNNL WARRGQQGPV
FCFAGHTDVV PPGPEAQWRH PPFQPVVEQG LLYGRGAADM KGSVAAFVTA LERYLAGGHR
PRGSLALLIT SDEEGPAVDG TRHVVETLSE RGERIDWCLV GEPSSTERVG DVVKVGRRGS
LNGRLTVRGD QGHVAYPHLA RNPVHQALAA LDELVTTRWD EGNDHFPPTS FQISNVQAGT
GATNVIPGEL EVTFNFRFST EVTADELQQR VEAVLDRHGL DGRIDWSLSG EPFLTAEGEL
VAATQAAVRD VCGDPPVLST SGGTSDGRFI APTGAQVLEL GPVNATIHKV NEHVRAADLD
TLSRIYEGVL RRLLG
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