Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_1723 |
Symbol | |
ID | 4268972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 1970630 |
End bp | 1972663 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638126481 |
Product | peptidase S15 |
Protein accession | YP_742559 |
Protein GI | 114320876 |
COG category | [R] General function prediction only |
COG ID | [COG2936] Predicted acyl esterases |
TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.463427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.841285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGGTGA TCGAATCTTT CGACGACGAT GTCCGGGTGA TCGAGAACGT CTGGATCCCC ATGTCCGACG GCGTGCGCTT GGCCGCGCGG GTCTGGCTGC CGGTGGGCTC CGCCGACCAC CCGGTGCCGG CGGTGCTGGA GTACATGCCC TACCGCAAGC GCGACTTCAC ACGCCTGCGT GACGAACCGC TGCACCACTA CTTCGCCGGC CACGGCTACG CCGCCATCCG CCTGGACGTG CGCGGCACCG GCGACTCCGA GGGCATCCTG CGCGATGAGT ACCTGGCCCA GGAGCAGGAC GACGCCGAGG AGGCCATCGC CTGGATCGCC GAACAGTCCT GGTGCAACGG CCGGGTGGGC ATGATCGGCC TGTCCTGGGC CGGCTTCAAC GCCCTGCAGG TGGCGGCCCG CCAGCCGCCG GCGCTGAAGG CCATCATCAC CATGTGCTCC ACCGACGACC GCTATGCCGA CGATGCCCAC TACAAGGGCG GCTGTCTGCT CAACGAGAAC CTGACCTGGG GCGCGGCCTT CTTCTCGCTC AACGCCTGCC CCCCCGACCC GGAGATCGCC GGTGAGCCCT GGCGCGAGCA ATGGCTGGAA CGGCTGGCAC ACAACCGCCT CTTCCCCGCC CTGTGGATGC GTCACCCCCA CCGGGATGAT TACTGGAAGC AGGGCTCGGT GTGCGAGGAC TATTCGGCCA TCCAGTGCGC GGTCTACGCC GTGGGCGGCT GGGCGGACGG CTACGTCAAC GCCATCCCAC GCCTGATGGC CGGCCTACAG GCGCCGCGCA AGGCGCTGAT CGGCCCCTGG CCCCACGCCT TTCCCCACGC CGCCGAGCCG GGGCCGCGCA TCGGCTTCTT CCAGGAAGCG GTGCGCTGGT GGGACTATTG GCTGAAGGAG GAAGAGAACG GCATCATGGA CGAGCCGCTG ATCCGTGCCT GGATGGAGGA CTGGATCGCC CCGGCGCCCC GCCACGACGA GCGCCCCGGC CGCTGGGTGG CGGAAACCGA GTGGCCCTCG CCGCGCATCA CCCCGCGCAC CTGGCACCTC AACGTGCTCT CGCTGGGCGA TCACCCGGAC CCGGAGGATC GCATGCGCCT GCGCTCACCG CAGACCACCG GGCTGCGCGC CGGCGATTTC TACGGCTTCG GCGCCGAGGG CGACGCCCCC ATGGACCAGC GCACCGACGA CGGCAAGTCG CTGGTCTTCG ACTCCGACCC GCTCAGCGAG CCGGTGGAGA TGCTCGGCAC GCCGGTCGTC ACCCTGGAAT TGGCCTGCGA CACGCCACTG GCCCACGTGA TTGTTCGCCT GAACGACGTG GCGCCGGACG GGGCCTCCGG CCGGGTCAGC TATGGGGTGC TCAACCTGGC GCACCGGGAC AGCCATGAGC GCCCCGCCCC GCTGGTGCCG GGGCAACGCT ACCGGATCAC CGTACGACTG AACGACATGG CCTACCGCTT CGCCCCCGGG CACACCATCC GGCTGGCGAT CTCCAGCGCC TATTGGCCGA TCATCTGGCC GGCACCGGAA CGGTCGGAGA TCACCCTGAT CACCGGGGCG AGCACGCTGG CGCTGCCCCT GCGACCGCCG CGACCGGAGG ATGACCAGCT ACCGGCCTTC GGGCCGCCGG AGCGCTGCCC CATCCCGACC CACACCATCC TCGAGACCGC CGAGCCGGAG CGCAGTATCG CCGTGGACCT GACCAACGAC GAGACCACCT ATACCGCCTT CGGGGACGCC GGTGACGTGG GTGGCGCGGC CCTGGCCCGG ATCGAGGACA TCGATCTCAC CCTGGGCTCC ACCATGCGTC GGGTGTTCCG TATCCAGGAG CAGGACCCGT TGTCCGCCGA GGCCGTCATC GAGCAGGAGA CCCGCTTCCA GCGCGGCGAC TGGGCGGTGC GCATCGACGC CCGCATCCGC CTCACCGCCG ATGCCGAGCA TTTCTTCATC CAGGCGATCC TGGACGCCTA CGAGAACGGG GCCCGCGTAG CCAGCCGGGA GTGGAACGAG GCCATCCCCC GGCTGCTCCT GTAA
|
Protein sequence | MRVIESFDDD VRVIENVWIP MSDGVRLAAR VWLPVGSADH PVPAVLEYMP YRKRDFTRLR DEPLHHYFAG HGYAAIRLDV RGTGDSEGIL RDEYLAQEQD DAEEAIAWIA EQSWCNGRVG MIGLSWAGFN ALQVAARQPP ALKAIITMCS TDDRYADDAH YKGGCLLNEN LTWGAAFFSL NACPPDPEIA GEPWREQWLE RLAHNRLFPA LWMRHPHRDD YWKQGSVCED YSAIQCAVYA VGGWADGYVN AIPRLMAGLQ APRKALIGPW PHAFPHAAEP GPRIGFFQEA VRWWDYWLKE EENGIMDEPL IRAWMEDWIA PAPRHDERPG RWVAETEWPS PRITPRTWHL NVLSLGDHPD PEDRMRLRSP QTTGLRAGDF YGFGAEGDAP MDQRTDDGKS LVFDSDPLSE PVEMLGTPVV TLELACDTPL AHVIVRLNDV APDGASGRVS YGVLNLAHRD SHERPAPLVP GQRYRITVRL NDMAYRFAPG HTIRLAISSA YWPIIWPAPE RSEITLITGA STLALPLRPP RPEDDQLPAF GPPERCPIPT HTILETAEPE RSIAVDLTND ETTYTAFGDA GDVGGAALAR IEDIDLTLGS TMRRVFRIQE QDPLSAEAVI EQETRFQRGD WAVRIDARIR LTADAEHFFI QAILDAYENG ARVASREWNE AIPRLLL
|
| |