| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1645 |
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| Symbol | |
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| ID | 4270246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1883724 |
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| End bp | 1886882 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638126403 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_742481 |
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| Protein GI | 114320798 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.697707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAAG CGTCGGCAAC AAAGCGAATC CTCGGCTGGC AGCCCTTTTA TCTCTCGCTG
CTGAGCATTG CCCTGATCGC AGCGGCGGCG GTCTGGTACG TCTGGGCGGA TTGGGACACC
CGGCGGTCGC TGCTGATCCG GGAGCACGTT GCCGCGGTGG ACACCGCGGT GCAGGCCGCC
AGCGGCGGCA TGGCCCTGGC CAGTGAGCTG TTGCACCAGG GGATGATCCT GCGGCCCCCG
GTCACTGGCG CCGTGGCGGC GGCCGGGCAG GGTGATCCGG CCGTCCGGGC GGAGTTGCGG
GACTGGCTAT ACCGGGAGCT GGGCCCGGTC TATCAGATGC TGCAGGCGCG GGGCCTGGAT
CAGATGCAGT TCGTGCTGGC CGATGGCGAG AGCCTGCTGC GTTTCCATGC CCCGGAAAGC
CATGGCGATA ACCTGTTACC GGACCGCGGT GACATTGCCC ACGTGCTGGC GACGGGGGAG
CCCCTGCAGG TCACCGGGCC GGGCCGCTTC ACGCAGGCGC ACCGGTATAT CACGCCCCTG
TATCATGGGG GCGAGCTGCT CGGTGTGGTG GAGACGGGGA TGTCCATGGC CGCGTTGCAC
CGGCGGCTGG ATGAGCTCGC CCCGGGCATG GCCTTCCGCA TGCTGCTCCG AGCGGACCGG
GTCACCGAGG TGGCCCGAGA GGAGGTGGCG GCCCGGTTTC ACGCCAGTCC CTTGTCCGAC
GCCTATGTCC TCGATCATGG GCACGACCTG GCGGACTGGT ATGCCGACGA AGATGGCGAG
GGGCTGGCGG CGGTGGAGGC GCAGCTGTCG CGGCAACCGG GCCTGGAGGG GGCGCTGGCC
CGCGGGGAGG CCTTCGGCCG TGCCCTGGAA TACCGGGGTC AGGGGTACCT GGTGGCGTTC
GTGCCGATGC TCGACGCCCG CGGCGAGGTC GTCGGCTATG TGGTGGGCTA CGGCCGGACC
GGGGCCCTGG GCAGTCTCAA ACACCAGTTC TATGCCGGCG CGGCCTTCGC GCTCCTGTTG
GTGCTCGGGG CCGGCGGGGT GTTGTTGCGG TTCCTGGCGG TGCAGCGTGG CCGACTGCAG
GACGAGGCCC GACTGCGGGC GATCTCCGAC ACCATGAACG AGGGGATGTA CGTCTTCGAC
GGCGAGGGTC GGATCACGCA CGTCAACCGG GCGGCGGAGA CCTTGCTGGG CTACCGTGCC
AGCGAACTGA TCGGGGCCCA TGCCCACGAC CTCTTCCACG CCCATGGGCC TGAGGGCCAG
TACATGCCGG CCGCTGAGTG CCCCGTTTAT CGGGCCGCGG TGCGAGGGGA GCGGCTCCAG
TTGGACTCCG AGTGGTTTCG TCGCCGCGAC GGCAGTCACG TGCCGGTTCA GATCTTCGGG
GCACCGATCG GGGACTGGCC GGAGGGCCAT GCGGGGTCGC GGCCAAACCC GACCTACGTG
GTCACCTTTG TTGACGAGAC CGAGCGCCGG AGAGAGCGCG AGGCCTTGCG CAAGCTCTCT
GCGGTGGTGG AGCAGGGGCC CGGTGCAGTG ATGATCACGG ACCCGCAGGG CGTGATCGAG
TACGTCAACC CGGCCTTCGA GCGGATTACT GGCTACACCG CGGAAGAGGC GGTGGGGCAG
ACACCGCGCA TCATCCAGTC GGGTCTGATG CCCTCGTCCT GGTACCGGGA GATGTGGGCG
GCCCTGAACC GGGGCGAGCC TTGGTGGGGT GAGTTCCACA ACCGACGCAA GACCGGTGAG
CTGTTCTGGG AGGCCGGGGT CGTGTTCCCT CTGCGTGACG ATCAGGGCGG GATCACCCAC
TACATCGCCA TCAAACAGGA TGTCACAGAG CGCAAAGACG CCGAGCGCCG GCTGGAGTAT
CACGCCACCC ACGACACCGT GACCGGCCTG CCCAACCGGG CGCTGGCCAT GGACCGCCTG
GAGACCGCGG TTCGCCGGCT GGCGCATCGG CGTGGTCGGG GCTCAGGGGC GTTGTTGGTC
CTGGACCTGA GCCAGTTTCG AAAGATCAAT GAGAGCCTGG GCCATGCCTC CGGCGATGAG
TTGCTGTGCC GAATCGCCGA GCGCCTGCAG GGCGCGCTCG GCCCACACGA CACCCTGTGC
CGGCCCGGTG GTGATGAGTT CCTGGTCATC CTGCCGGAGC TGCGCACCGC CCGACAGGCC
GAACAAGTGG CCAAGGCGCT CCTGGCCACC CTGAAGGCCC CACTGGTGCT GGCCGACCAG
GAGATATTCA TGGACGCCAG GGTGGGGGTG ACCCTGTTCC CGGAAGACGG GACCGATAGC
AGTACGCTGT TGCGTAACGC TTACGCCGCC CTGTCCCAAG CCAAGCAGGT GGCGCGGGGT
GACTTCCGCT TCTTCAAACC CGAGGCGAAT GAGCGGGCCC ACCGCTGGCT GGCGCTGGAG
GGGCGGCTGC GCCGTGCGCT GGAACAGGAG ACGCTGCACC TGGTGTTTCA ACCGCTGGTC
GATGCCCGGA CCCTGCGGCC GACGGGGTTC GAAACCCTCC TGCGCTGGAC GCTGGAGGAG
CACGGGCCGG TCTCTCCGGG TGAGTTCATT CCCATGGCCG AGGAGACCGG GCTGATCATC
CCCATGGGCG AATGGGTTCT GCGCAAGGCC TGTCAGCAGG CCGCCCGCTG GCGGGCCCAG
ACCGGGCATT GCTATCGGAT GGCGGTGAAT GTCTCGCCCA TCCAGATCAC GGGGAGCGAT
TTCGTGGCCA CCGTGCGCAC CAGCCTCAGG CGTACGGGTC TGCCCGCCGA GTGCTTGGAA
CTGGAGATTA CCGAGCGCAT GCTGCTTGGG GGCCAGCGGC GCGTGCTGCA GAGCCTGCAG
GCGCTGCGCG ATTTGGGGGT GGGGCTGTCG TTGGACGACT TCGGCACCGG CTACTCAGCC
CTGAGCTACC TGCGCCAGAT GCCGTTTTCC GTGCTCAAGA TCGACCGCAG CTTTGTCCAG
GGCGCGGCGG CGGGCCCCCG CGGCGAGCAG CTGTTGTGCT CGATCATCGG TATGGCCCAG
GGCCTGGGTC TGCGGGTGGT GGCCGAAGGG GTGGAGACAG AGGCCCAGGT GGCCCTCCTG
CAGCGCGAGG GCTGTGATCT GCTGCAGGGG TACCACTTCG CCCGACCCAT GGCGGCCGAG
GCCGTCACCC GTCTGCTCCA GGGCCCGGAG CGCCCTTAA
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| Protein sequence | MLKASATKRI LGWQPFYLSL LSIALIAAAA VWYVWADWDT RRSLLIREHV AAVDTAVQAA
SGGMALASEL LHQGMILRPP VTGAVAAAGQ GDPAVRAELR DWLYRELGPV YQMLQARGLD
QMQFVLADGE SLLRFHAPES HGDNLLPDRG DIAHVLATGE PLQVTGPGRF TQAHRYITPL
YHGGELLGVV ETGMSMAALH RRLDELAPGM AFRMLLRADR VTEVAREEVA ARFHASPLSD
AYVLDHGHDL ADWYADEDGE GLAAVEAQLS RQPGLEGALA RGEAFGRALE YRGQGYLVAF
VPMLDARGEV VGYVVGYGRT GALGSLKHQF YAGAAFALLL VLGAGGVLLR FLAVQRGRLQ
DEARLRAISD TMNEGMYVFD GEGRITHVNR AAETLLGYRA SELIGAHAHD LFHAHGPEGQ
YMPAAECPVY RAAVRGERLQ LDSEWFRRRD GSHVPVQIFG APIGDWPEGH AGSRPNPTYV
VTFVDETERR REREALRKLS AVVEQGPGAV MITDPQGVIE YVNPAFERIT GYTAEEAVGQ
TPRIIQSGLM PSSWYREMWA ALNRGEPWWG EFHNRRKTGE LFWEAGVVFP LRDDQGGITH
YIAIKQDVTE RKDAERRLEY HATHDTVTGL PNRALAMDRL ETAVRRLAHR RGRGSGALLV
LDLSQFRKIN ESLGHASGDE LLCRIAERLQ GALGPHDTLC RPGGDEFLVI LPELRTARQA
EQVAKALLAT LKAPLVLADQ EIFMDARVGV TLFPEDGTDS STLLRNAYAA LSQAKQVARG
DFRFFKPEAN ERAHRWLALE GRLRRALEQE TLHLVFQPLV DARTLRPTGF ETLLRWTLEE
HGPVSPGEFI PMAEETGLII PMGEWVLRKA CQQAARWRAQ TGHCYRMAVN VSPIQITGSD
FVATVRTSLR RTGLPAECLE LEITERMLLG GQRRVLQSLQ ALRDLGVGLS LDDFGTGYSA
LSYLRQMPFS VLKIDRSFVQ GAAAGPRGEQ LLCSIIGMAQ GLGLRVVAEG VETEAQVALL
QREGCDLLQG YHFARPMAAE AVTRLLQGPE RP
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