| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1643 |
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| Symbol | |
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| ID | 4270365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1880357 |
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| End bp | 1882057 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638126401 |
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| Product | ABC transporter related |
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| Protein accession | YP_742479 |
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| Protein GI | 114320796 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.564433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAACA AAGTGGATAA ACAACGGGCC CGCCATTGGC TGGCCCAACG GGCACGGCCA
GCCCGGAACC TGCTGGTCTT GGCCAGCGGG GCCGGATTGA CCCAAGGCCT TCTGATCATA
CTGCAATCGG CGCTCATCGC CCATGTGGTG CACGCCGCCG TGATCGAGGA AGTGCGCCTG
GACACCCTCT GGCCGGCCCT GCTCGGGCTG CCGGTGATCT TCCTCGTTCG GGCGGTCTGC
GCCTGGGGCC AGGAGGTGGC CGGCGTCCGG GCCGCCACGC GCATCAAGGA CCGGTTGCGC
GAAGAGCTGT ATGCGCATCT GCTGGCCCTC GGCCCGGTCG GCCTGGGCGT GCGCCAGAGC
GGGACAGTGT CCACCGCCCT GCTTGAGCAG GTGGAGGCAC TTGAGGGCTA CTACGCCCGC
TTTTACCCGC AGATGATCAT CGCCGTGGGC GTCCCCCTCC TCATCCTGCT GGTGGTCTTC
CCGCTGGACT GGCTGGCGGC ACTGCTGCTG TTGTTCACCG CCCCGCTGAT CCCCCTGTTC
ATGGCCCTGG TGGGGTTCGG CGCGGAACAA CTGCAGCAGC AGCAACTGGT GGCCTTGGGG
CGGCTCTCCG GCTGGATGCT GGACCGCATC ACCGGCCTGA CCACCCTCCG GCTGTTCGGC
CACACAGGGC ATGACCAAGC CCGCCTGCGG GAGGCCTCGG ACGACTTCCG CCAACGTACC
ATGAAAGTCC TGCGGGTGGG GTTCCTCTCC TCGGCGGTGC TGGAGTTTTT CGCCTCCGTA
GCCATCGCCA TGTTGGCCAT CTATATCGGC CTGGGCCTGC TCGGCTATAT CACCTTCGGT
CCCTCCCCGG AGCTGACGCT GTTCAGCGGT TTGTTCATCC TGCTGCTGGC CCCGGAGTTC
TTCCAGCCGT TGCGCACCCT AGCCACCCAT TACCACGACC GGGCCGGCGC CATCGGGGCG
GCCGAGGAGC TGATCGAGTT GCTGGAGACG CCGCCGATCC GCCCGGTGAA CGGCAACCGG
CGGCCCACGC TGGACGGCCC CCCGGCCTTG CGCCTGGAGG GGGTCAGCGT CACGCTCCCC
GGCGGCGTCA CCGCCCTGCG CGACTGCAGC ATGAATGTCG CCCCCGGTGA GCGGGTCGTA
GTGGCCGGGC CGAGCGGTTG CGGCAAGTCC ACGCTCATCC ACCTACTACT GGGGCTGGTG
GAGGGGCAAG GCGATATCCG CCTGAACGGC CACCCGCTGC GGGACCTGGA CCCGACCTGG
CTGCGGGAAC ACGTGGCCTG GGTGGGCCAG CGCGCCCACC TGTTCCACGG CACCCTCGCC
GACAATATCG CCCTGGGCTA CCCGGGCGCC CCCCGCGACC AGATCGAGGC GGCGGCGCGC
AAGGCGCGGG TCACCGCCTT CAGCCGATTA CTGCCCGCCG GCCTGGACAG CCGCATCGGG
GAACGGGGCG AGGGCCTCTC CGGCGGCGAG GCGCAGCGCG TGGCGGTGGC CCGCGCCCTG
CTCCGCGATA CCCCATTGTT GCTGCTGGAC GAACCCACGG CACACCTGGA TCCGGAGAAC
GAGCAGGCCC TGCTGGCCAC CCTCGCCGAG GCGGCCGAGG GCCGGACGGT GATCATGACC
ACACACCGCC CGGCAGGCAT GGCGTGGGCG GACCGGGTGC TGACCCTGCG GGATGGACAA
CTGCGGGAGG CGACGCCATG A
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| Protein sequence | MSNKVDKQRA RHWLAQRARP ARNLLVLASG AGLTQGLLII LQSALIAHVV HAAVIEEVRL
DTLWPALLGL PVIFLVRAVC AWGQEVAGVR AATRIKDRLR EELYAHLLAL GPVGLGVRQS
GTVSTALLEQ VEALEGYYAR FYPQMIIAVG VPLLILLVVF PLDWLAALLL LFTAPLIPLF
MALVGFGAEQ LQQQQLVALG RLSGWMLDRI TGLTTLRLFG HTGHDQARLR EASDDFRQRT
MKVLRVGFLS SAVLEFFASV AIAMLAIYIG LGLLGYITFG PSPELTLFSG LFILLLAPEF
FQPLRTLATH YHDRAGAIGA AEELIELLET PPIRPVNGNR RPTLDGPPAL RLEGVSVTLP
GGVTALRDCS MNVAPGERVV VAGPSGCGKS TLIHLLLGLV EGQGDIRLNG HPLRDLDPTW
LREHVAWVGQ RAHLFHGTLA DNIALGYPGA PRDQIEAAAR KARVTAFSRL LPAGLDSRIG
ERGEGLSGGE AQRVAVARAL LRDTPLLLLD EPTAHLDPEN EQALLATLAE AAEGRTVIMT
THRPAGMAWA DRVLTLRDGQ LREATP
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