Gene Mlg_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1642 
Symbol 
ID4270364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1878840 
End bp1880279 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content64% 
IMG OID638126400 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_742478 
Protein GI114320795 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTGGC GCGTTGTCGC AGCGGTGGGC CGCCGGGTGC TGAATCTCGT TAGGATGCAG 
GGAAACAATC ACGTGTTGAC TCAGATGCAG GATACCCTTC GGTTCAAGCC CCGTCAGGTG
CTGCGGATAC TCATGTGGCT GCGGCTGTGC GCTGTGATAG GCCAGACTAT CACGGTGCTG
GGCGTCTATT ACCTGATGGG GCTGGACCTG CCGCTGGCCG CCCTGCTGAC CTGTGTGGGG
CTGCTGGCGG CGTTCAACGC CGCGGTCTAT GTCCGCCTGC GGCTGATCAA GGAGGCCAGT
CACCGCGAGG TCTTCATCCA CCTGATGGTG GACTCCCTGG TGCTCACCGC CCTGCTGTTC
CTCTCCGGCG GCCCCAGCAA CCCCTTTGTC TCGCTCTACC TGGTGCCCAT CGCCCTGGCG
GCAGTGGCCC TGCCCAGCAG CTATGCCTGG TGGGTGGGCG CGGCCAGCGT GGTGCTCTAT
GGCTTCCTGC TGGTCTGGTT CCTTCCCATG GAGGCCCCCT ACGAGGTGGT GGCTGGGGAT
ATCAACCTGC ATCTGTTCGG CACTTGGGTG AATTTTATCC TCAGTGTCGT CCTTATCACC
TTTTTCGTCA GCCTGATGGC CGCGACCCTG CGGCGCCAAG ATATGAAACT GGCCGAAGCC
CGCGAGGGTA CTCTGCGCAA TGAGCAGATC GTGGCCATCG GCACGCTGGC GGCCGGGGCG
GCCCACCAGC TCGGGACGCC GTTATCGTCC ATGTCCATGG TGGTGGAGGA GCTGCGCGAC
AGCCGTGAGG ACGATGAAGC GCTGCAGGAG GACCTGGACA TCCTCGAATC CCAGATCCAG
GTCTGCAAGC AGACCCTGGC GGAACTGATG GAGGCGGCCG GCAACGGCCA GGCGCGCAGT
GGCGGCCAGG CCAGCCTGCG GCAGTTCATC GGGCGGATCA TCAACACCTG GAGCATCATG
CGGCCTGATG TGCGCCATCG GCTGCATTTC CAGGAGCCGT TCGAAAACCC CTGCATCTTC
ACCGAGCAGA CCCTGATGCA CGCCATCATC AATCTGCTGA ACAACGCCGC CGATGCCTCG
GTGGCCAACG GCAGCGACCG GGTGCAGATC GACGTGGCCT GCCGCGACGG CGAGCTGACC
CTGAGCGTCA TCGACGAGGG CCAGGGGTTG GACGCCGATG CCATGGAGCA GGCCGGCCGG
GTGATCCATA CCACCAAACC GGAGGGGCTG GGGATTGGCT TGGTGCTGTC CAACGCGACG
GTGGGCCGGT TCGGGGGCAG TGTGACGCTC CTGCCGGCGG ACACCGGCGG GGTGCTCTCG
CGCATTACGC TGCCGCTGAA TGATTTACGC GTCAGTGATA AATTAGCGGA TGAACCGGGC
GGCTGCCGCC AACCGCAGGC CGCCGATCAC CCGCTAAACA AGCAGGGAGA GAGCACGTGA
 
Protein sequence
MLWRVVAAVG RRVLNLVRMQ GNNHVLTQMQ DTLRFKPRQV LRILMWLRLC AVIGQTITVL 
GVYYLMGLDL PLAALLTCVG LLAAFNAAVY VRLRLIKEAS HREVFIHLMV DSLVLTALLF
LSGGPSNPFV SLYLVPIALA AVALPSSYAW WVGAASVVLY GFLLVWFLPM EAPYEVVAGD
INLHLFGTWV NFILSVVLIT FFVSLMAATL RRQDMKLAEA REGTLRNEQI VAIGTLAAGA
AHQLGTPLSS MSMVVEELRD SREDDEALQE DLDILESQIQ VCKQTLAELM EAAGNGQARS
GGQASLRQFI GRIINTWSIM RPDVRHRLHF QEPFENPCIF TEQTLMHAII NLLNNAADAS
VANGSDRVQI DVACRDGELT LSVIDEGQGL DADAMEQAGR VIHTTKPEGL GIGLVLSNAT
VGRFGGSVTL LPADTGGVLS RITLPLNDLR VSDKLADEPG GCRQPQAADH PLNKQGEST