| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1561 |
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| Symbol | |
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| ID | 4269935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1785882 |
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| End bp | 1786631 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638126318 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_742398 |
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| Protein GI | 114320715 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.925231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGAGC CCCCGATGCA AAGCTTCGAG CACAAACTGC AGCAATTCGA TCCCGGGGTC
ATCTGGCTCG ACGACGACAA CCAGGTGACG GCCATGAACG CGGTAGCCAG CCGCATCCTG
GGCGTGCGCC CGGGCGAGGT GCTGGGTCAG GAGGTATTGC AACTGCACCC GGAGAAAAGC
CGCGGCAAGA TCGCTTGGCT GTTGGAATCG ACCCACGCGG CCGATGGCTG TCCGGTCAAA
TCACCGCCGC CCATGACCAT GATGATCAAC ATCCCCGACC GGGTCCTGTT GATCAAGCTG
TCACGGATGT ACGGCCCGGA GGGCCGGGCG GCGGGCGCTT GCCTGGTCTT TTACGACCTC
ACCGAGGTGA CCTCCCGCGA GGCGCCCCGG GACCCCGTGG CACCACGTCC CCGGCAATTG
CTGAAGCTAC CCGTCTACAA GAACCAACGG GTGGTGCTGC TGAACCTGGA GCAGGTGGTG
CGCATGCGCG CCGAGGGCCA CTACACCGAG GTCTTCCAGG ACGGCGAGCA CTTCCTCTGC
AACCTGTCCC TCGCCGATCT GGAGGGGCGC CTGGACCCGA CGCGCTTCAT GCGCGTGCAC
CGCTCCCACA TGGTCAACCT GCATTTCGCC GTCGCCCTCG AAAAAGAGGG CGAGCAGTAT
CAGCTCGTGC TGCAGGACCG CAATGAGACC CGCATCCCGG TTAGCCGCGG CAACGCCCCC
CGGGTCCGCG CCCTGTTCGG CCTGGCCTGA
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| Protein sequence | MAEPPMQSFE HKLQQFDPGV IWLDDDNQVT AMNAVASRIL GVRPGEVLGQ EVLQLHPEKS
RGKIAWLLES THAADGCPVK SPPPMTMMIN IPDRVLLIKL SRMYGPEGRA AGACLVFYDL
TEVTSREAPR DPVAPRPRQL LKLPVYKNQR VVLLNLEQVV RMRAEGHYTE VFQDGEHFLC
NLSLADLEGR LDPTRFMRVH RSHMVNLHFA VALEKEGEQY QLVLQDRNET RIPVSRGNAP
RVRALFGLA
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