| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1488 |
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| Symbol | |
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| ID | 4269961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1701577 |
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| End bp | 1702491 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638126246 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_742327 |
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| Protein GI | 114320644 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.221019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACAGCAG CGACGAACAG CGCTGAGACG CCATTAGCGG AACTGGAGGC CTTCCTCGAT
GCCTTGTGGA TGGAGCAGGG CCTGGGTGAG CGCACCCTGT CCGCCTATCG CAGCGACCTG
TTGGGCTTCC AGCGCTGGCT GGGCGGGCAG GGCGGCAGCC TGTTGAGTGC CCGGCGCGAT
CAGGTGCTGG CCTATCTGGG CGGGCGGTTG GGTCAGGGCG CAAAACCGCG CAGTGTCGCC
CGCCTGCTCA CCAGCCTCCG CCGGTTTTAC CGCTATCAGC TTCGCGAGGG CCGGGTGGCC
GAGGATCCGA CACGGGACGT AGAGAGCCCG CGGCTGGGGC GGCCGTTGCC GGGGGGGTTG
AGTGAATCAG AGGTCGAGCG CCTGCTCGCC GCCCCGGACC CGGAGACCCC TTTGGGCCAG
CGCGACCGCT GCATGCTGGA GGTGCTCTAC GCCAGCGGCC TGCGGGTGTC GGAGTTGGTC
GGCCTGAGCC TGTCGGAGCT GTCCCTGTCC CAGGGGCTGG TCCGGGTGGT GGGCAAGGGG
GGGCGCGAGC GGCTGGTGCC GCTGGGCGAA ACGGCGTTGG AGCAGGTGCA ACAGTGGTTG
CGGGAAGGCC GGCCGGCCCT GTTGGGGCGA CGGGTGAGCG ACGCGGTCTT TGTCACCGGC
CGGGGTGAGG GGCTGACCCG GCAGGCGTTC TGGTACCGGG TGAAGAAGCA CGCCCGGTCG
GTGGGTATCA CGCGCCCCAT CTCGCCGCAC ACGCTGCGGC ATGCCTTCGC CACCCATCTG
CTGAACCATG GCGCCGACCT GCGGGTAGTA CAGCTTCTGC TCGGCCACAG CGATCTCTCC
ACCACCCAGA TCTATACCCA TGTGGCGCGA CAGCGGCTGC AGACCCTGCA TGCCGAGCAC
CACCCCCGGG GCTAG
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| Protein sequence | MTAATNSAET PLAELEAFLD ALWMEQGLGE RTLSAYRSDL LGFQRWLGGQ GGSLLSARRD
QVLAYLGGRL GQGAKPRSVA RLLTSLRRFY RYQLREGRVA EDPTRDVESP RLGRPLPGGL
SESEVERLLA APDPETPLGQ RDRCMLEVLY ASGLRVSELV GLSLSELSLS QGLVRVVGKG
GRERLVPLGE TALEQVQQWL REGRPALLGR RVSDAVFVTG RGEGLTRQAF WYRVKKHARS
VGITRPISPH TLRHAFATHL LNHGADLRVV QLLLGHSDLS TTQIYTHVAR QRLQTLHAEH
HPRG
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