Gene Mlg_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1479 
Symbol 
ID4269952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1690318 
End bp1690518 
Gene Length201 bp 
Protein Length66 aa 
Translation table11 
GC content57% 
IMG OID638126237 
Productcarbon storage regulator, CsrA / carbon storage regulator, CsrA 
Protein accessionYP_742318 
Protein GI114320635 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0325311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTC TCACTCGGCG CGTTGGTGAG ACGCTGATGA TCGGAGACGA CGTCAGCGTG 
ACCGTGCTCG GTGTCAAGGG CAACCAGGTG CGTATTGGCG TGAATGCGCC GCGTGATGTG
TCCGTGCATC GTGAAGAGAT TTACGACCGT ATCCGCCACG AAAAAGAGGG TGGTCCGGAA
GACAAGGGCA ATTCCGAGTA G
 
Protein sequence
MLILTRRVGE TLMIGDDVSV TVLGVKGNQV RIGVNAPRDV SVHREEIYDR IRHEKEGGPE 
DKGNSE