| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1429 |
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| Symbol | |
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| ID | 4270427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1632838 |
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| End bp | 1633821 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638126185 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_742268 |
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| Protein GI | 114320585 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.550632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGAC ATGAGCAACG GGCGGATAAG AGCATGAGCG GCGTACGACA GGTGCGCATC
GGGCCGGAGG ACGCCGGCCA GCGGGTGGAC AATTTCCTGA TGCGGCAGCT CAAGGGCGTG
CCCCGGTCAC TGATATACCG GCTGCTGCGC AGCGGGCAGG TCCGGGTCGA CGGCAAGCGC
ACCAAACCGC CGCGCCGGCT GGCCACGGGG GAGACGGTGC GTATTCCGCC GGTCCAGACG
CGCGCCCCCC AAGAGGCCAC GCCGCCCGCC CGCCTGCAGG GCGAATTGGC CCAGCGCATC
CTCTACGAGG ACGACCGGCT GCTGGTGATC GACAAGCCCT CCGGACTGGC CGTGCACGGC
GGCAGCGGAC TGGCCTGGGG GCTGATCGAG GTCTTGCGCC AGGCCCGGCC CAGCGCCCCC
TTCCTCGAGC TGGTCCACCG GCTGGACCGC GCGACCAGTG GCTGCCTGAT GGTCGCCAAG
CGGCGCAGCG CGTTGCGCGA ACTGCACGAG CAGCTCCGCA CGGGCGCTGT ACACAAACGT
TATCTGGCCC TGCTCACCGG CGCACTCGGG CGCGGCCCCA TTCCGGTGGA GGCGCCGTTG
GAGCGCCGCA GTGGACCGGC AGGGGGCGTG CGGGTCGCCA GCCACGGCAA GCTGGCGCGG
ACGGTGTTCC GGGCCGTGGC GCGCCCCGGG GGCATGACGC TGGCGGAGGC CGATATCGCC
ACCGGGCGCA CCCACCAGAT CCGGGTCCAC GCGGCCCACC TCGGCATGCC CATCGCCGGC
GACGACCGCT ACGGGGAGCG GGCGGTCAAC CGCCGGTTGA GGGGGTTGGG GCTCAAGCGC
CTGTTCCTCC ACGCCCACCG CCTGGAACTG TCCGCCCCCG GCACCGGTCA ACCCTTATCG
ATCGAGGCGC CGCTGCCGGA CGAGCTGGCG GCGGTCGTGG CGCAGCTCCA GGCGCCGCAA
CAATCCAATG ACTCAACGGG GTAA
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| Protein sequence | MRRHEQRADK SMSGVRQVRI GPEDAGQRVD NFLMRQLKGV PRSLIYRLLR SGQVRVDGKR
TKPPRRLATG ETVRIPPVQT RAPQEATPPA RLQGELAQRI LYEDDRLLVI DKPSGLAVHG
GSGLAWGLIE VLRQARPSAP FLELVHRLDR ATSGCLMVAK RRSALRELHE QLRTGAVHKR
YLALLTGALG RGPIPVEAPL ERRSGPAGGV RVASHGKLAR TVFRAVARPG GMTLAEADIA
TGRTHQIRVH AAHLGMPIAG DDRYGERAVN RRLRGLGLKR LFLHAHRLEL SAPGTGQPLS
IEAPLPDELA AVVAQLQAPQ QSNDSTG
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