| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1399 |
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| Symbol | |
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| ID | 4270621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1603920 |
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| End bp | 1604990 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638126155 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_742238 |
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| Protein GI | 114320555 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.372686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACAC TTAGCCCTGA CTGGCGGGGA CCGACGCGCT CAGGGTATGC TCGCGCTCGA
ACAGCGCAAC CTGATTGGAA CATGAACATC GGCCCTTGGA AACTCTCCGG CCGGGTGCTG
CTCGCACCCA TGGCCGGCAT CACCGACCTC CCCTTTCGTC AGCTCTGTCG CCAATGGGGT
GCCGCCCTCG CGGTTTCGGA GATGCTGTCC GCCGATCCAA CCCTGCGCAA GACGCGCAAG
AGCCAATGGC GCGCCACCCT CGCCGACGAC GAGTGCCCAC GGGTGGCGCA GATCGCGGGC
GCGGATCCGG TCGCCCTAGC GGAGGCGGCC CGCTACAACG TACAGCGGGG CGCCCAGGTC
ATCGACATCA ACATGGGCTG TCCGGCAAAG AAGGTCTGCA ATCGCATGGC CGGCTCCGCA
CTGCTCGCGG ACGAGCCCCT GGTGCGCCGG ATCCTGACCG CGGTCGTGTC CGCGGTGGAG
GTCCCGGTCA CCCTGAAGTA TCGCACCGGT CCGTCGCCCG AGCGGCGCAA TGCCGTGGCC
ATCGCCCGGA TGGCGGAGGA CGCCGGGGTG GCCGCACTGA CGCTTCACGG CCGGACACGG
GTCCAGGCCT ACCAGGGTCA GGCCGAATAC CGCAGCGTGG AGGCGGTCTG TCGGGCGGTG
GACATCCCGG TCGTCGCCAA CGGCGATATC GATAGCCCAG ACAAGGCGCG GCAGGTGCTG
GACGAAACCG GCGCCGATGC GGTCATGGTC GGGCGCGCGG CCCAGGGCCG ACCCTGGCTC
TTCCAGGCGA TTCACACCTA TCTGGAGACC GGTACGCGGG TCGCCACGCC TTCGCTGGCG
GTGCGCAAGC AGACCCTGCT GACCCACCTG CGCGAGATTC ATCGCTTTTA CGGCGACTGG
ATGGGGCCCC GCATCGCGCG CAAGCACATC AAGTGGTATC TACAGGCTCT GCAGGTGGAT
CGGTGCCATG TGCAGCCACT GATGCAGCCC ACTGCCCCGG AGGCGCAACG GGTGGCGGTT
GCCGATTGCC TGTCACGGCT CAACGAGGCG CCGGCGGCGG CGCCTGCATA G
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| Protein sequence | MQTLSPDWRG PTRSGYARAR TAQPDWNMNI GPWKLSGRVL LAPMAGITDL PFRQLCRQWG
AALAVSEMLS ADPTLRKTRK SQWRATLADD ECPRVAQIAG ADPVALAEAA RYNVQRGAQV
IDINMGCPAK KVCNRMAGSA LLADEPLVRR ILTAVVSAVE VPVTLKYRTG PSPERRNAVA
IARMAEDAGV AALTLHGRTR VQAYQGQAEY RSVEAVCRAV DIPVVANGDI DSPDKARQVL
DETGADAVMV GRAAQGRPWL FQAIHTYLET GTRVATPSLA VRKQTLLTHL REIHRFYGDW
MGPRIARKHI KWYLQALQVD RCHVQPLMQP TAPEAQRVAV ADCLSRLNEA PAAAPA
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