| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1354 |
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| Symbol | rumA |
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| ID | 4268608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1551229 |
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| End bp | 1552566 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638126107 |
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| Product | 23S rRNA 5-methyluridine methyltransferase |
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| Protein accession | YP_742193 |
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| Protein GI | 114320510 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.961347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCGTA GGCGGCGGCG CCTCCCGCGG GAGCCCTTCG AGATAGCGAT CACCGGCCTG
TCCCACGAGG GGCGCGGCAT CGCCCACCAC GACGAACGCA CGCTGTTCGT GCACGGTGCC
CTGCCGGGTG AGCGGGTGCG GGCGGTCTAT ACCAAGCGTC GGCGCAGCGT CGCCGAGGCC
CGGGTGGTGG AGGTGGTGTC GCCCGCCCCG GAGCGCATCG CGCCCCATTG TCCCCATTTC
GGGGTCTGTG GCGGCTGCAG CCTGCAGCAT CTCACCCCGG AGCGGCAGGT GGAGCTCAAG
CAATCGGTGC TGATGGAGCA GTTCCACCAT ATGGGGGGCG TGCAACCGGA GCGCGTGCTG
GCCCCGCTCA CCGGCGCACC GTGGGGGTAT CGACGCAAGG CGCGCCTGGC GGTCAAGCAC
GTGCCCCGCA AGGGGGGGGT CCTGGTGGGG TTCCGGGAGA AGCACAGCCC CTTTGTCGCG
GAGATGGACC GCTGCCCGGT GCTCGACCCA CGGGTGGGGG AACGGCTCAC CGAGCTCGGG
CGCCTGATCG AGGGGCTCTC CATCCCCGAC CGGGTGCCGC AGATTGAGGT GGCCCTGGGC
GACGAGACCG GTGCCCTGGT CTTCCGAAAC CTGGCGCCCT TGACCGCGGC GGACCTCAAC
CGCCTCGCCG GTTTCGCCCG CGACAGTGGC CTGGCGGTCT ATCAGCAGCC GGGTAACGAG
GCGACCATGG CCCTGGTGCA CGACCCGGTG GGCCGGCGAT TGGACTACGC TCTGCCAGGG
CATGGCGTGC GCCTGGGCTT CCGGCCCGGC GACTTCACCC AGGTCAATGC CGAGATCAAC
CGGGCTATGG TGGATCAGGC GCTGGATCTG CTGGCGGTGG AGCCGGGGCA GCGGGTCCTG
GACCTGTTCT GCGGCTTGGG TAATTTCACC CTGCCGCTGG CCCGGCGGGC CAGCGAAGTG
GTCGGTGTGG AGGGGGCCGA GGCGCTGGTG GAACGCGGCC GGGAGAACGC CCTGCGCAAC
GGCCTGGATA ACGTCCGCTT TTACGGGGCC GACCTCACCC TCGCTGCGGC CGATCAACCC
TGGGCGACCG GCGGCTTCGA CCGGGTGCTG TTGGATCCGC CGCGGTCTGG CGCCTTCGAG
GTGCTGGGGT TGGTGGCGGC CCTCGGGCCG AAGCGGATCG TCTACGTCTC CTGTGGCCCG
GCCACCCTGG CCCGCGATGC CGGCGAGCTG GTGCACCGGC ACGGCTACCG GCTGACCGCC
GCCGGGGTCA TGGACATGTT CCCGCACACG GCCCATGTCG AGAGCATGGC GGTGTTCCAA
AGAGAGGCGC AGGACTGA
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| Protein sequence | MGRRRRRLPR EPFEIAITGL SHEGRGIAHH DERTLFVHGA LPGERVRAVY TKRRRSVAEA
RVVEVVSPAP ERIAPHCPHF GVCGGCSLQH LTPERQVELK QSVLMEQFHH MGGVQPERVL
APLTGAPWGY RRKARLAVKH VPRKGGVLVG FREKHSPFVA EMDRCPVLDP RVGERLTELG
RLIEGLSIPD RVPQIEVALG DETGALVFRN LAPLTAADLN RLAGFARDSG LAVYQQPGNE
ATMALVHDPV GRRLDYALPG HGVRLGFRPG DFTQVNAEIN RAMVDQALDL LAVEPGQRVL
DLFCGLGNFT LPLARRASEV VGVEGAEALV ERGRENALRN GLDNVRFYGA DLTLAAADQP
WATGGFDRVL LDPPRSGAFE VLGLVAALGP KRIVYVSCGP ATLARDAGEL VHRHGYRLTA
AGVMDMFPHT AHVESMAVFQ REAQD
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