Gene Mlg_1347 details

Gene Information

• Locus tag: Mlg_1347
• Symbol: rnc
• ID: 4270020
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alkalilimnicola ehrlichii MLHE-1
• Kingdom: Bacteria
• Replicon accession: NC_008340
• Strand: +
• Start bp: 1545986
• End bp: 1546672
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638126100
• Product: ribonuclease III
• Protein accession: YP_742186
• Protein GI: 114320503
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.316032
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 41
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCAACGC CCAAGGACGC CCTGCAGGAC CGGTTGGGGT ACCGCTTTCG CCGGCCGGAG 
TTGTTGGACG AGGCGCTCAC CCACCGCAGT GTCACCGGCC CCGACAACGA ACGGCTGGAG 
TTCCTCGGCG ACGGCATCCT CAACTTTGTC ATCGCCGATG AGCTGTACCA CCGTCGCCCC 
GACGCCACCG AGGGGGTGTT GAGCCGGCTG CGTGCCACCC TGGTCAACGG CCGGACCCTG 
GCGGAGATCG GCAAGGGCTT GGACGTGGGC ACGGCCCTGC GCCTGGGCGG CGGCGAGATG 
AAGAGCGGAG GGCAACGCCG GAAGTCCATC CTGGCGGATG CGGTGGAGGC GCTGTTCGGG 
GCCATCTACC TGGACGGGGG TTTCGACCCG AGCCGGGAGA CCATTCTGCG GCTCTACCGG 
GACCGCCTGG CATCCCTGCC CACGGAGGCG GAACTCAAGG ACCCCAAGAC CCGTCTGCAG 
GAGCATCTGC AGGCGGGGCG CCGGCCCCTC CCGCGCTATG AGGTGCTGGA GGTCAGTGGC 
CAATCCCATG ATCAGACCTT CCGCGTGGCC TGCCGACTGC AGGACGCGGC GGTCACCGCC 
GAAGGCGAGG CCGGCAGCCG GCGCAAGGCG GAACAACAGG CCGCGGAGCA GATGCTGAAG 
CGGTTGGAGG ACAAGCATGA GCGATGA 

 

Protein sequence

MPTPKDALQD RLGYRFRRPE LLDEALTHRS VTGPDNERLE FLGDGILNFV IADELYHRRP 
DATEGVLSRL RATLVNGRTL AEIGKGLDVG TALRLGGGEM KSGGQRRKSI LADAVEALFG 
AIYLDGGFDP SRETILRLYR DRLASLPTEA ELKDPKTRLQ EHLQAGRRPL PRYEVLEVSG 
QSHDQTFRVA CRLQDAAVTA EGEAGSRRKA EQQAAEQMLK RLEDKHER