Gene Mlg_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1334 
SymbolsdhA 
ID4270007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1533367 
End bp1535157 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content66% 
IMG OID638126087 
Productsuccinate dehydrogenase flavoprotein subunit 
Protein accessionYP_742173 
Protein GI114320490 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.356881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCG ATTACAAAAT TATCGATCAT CATTACGATG TGGTGGTGGT GGGCGCCGGC 
GGTGCCGGTC TGCGCGCCAC CTTTGGTATG GCCGAGAAGG GCCTGAAGAC GGCCTGCGTC
ACCAAGGTCT TTCCCACCCG TAGCCATACC GTGGCGGCTC AGGGGGGCGT GTCCGCCGCG
CTGGGCAACA TGGGCGAGGA CGACTGGCGC TATCACGCCT ATGACACCAT CAAGGGGTCG
GACTGGCTGG GCGACCAGGA CGCCATCGAG TACATGTGCC GCGAGGCGAT CCCGGCCATT
ATCGAGCTGG AGCACTACGG CGTGCCCTTC TCCCGCACCG AGGAGGGCAA GATCTACCAG
CGGCCCTTCG GCGGTATGAC GGTGCGTTAC GGCGAGGGCA CGGCGCAGCG CACCTGCGCC
GCCGCCGACC GGACCGGCCA CGCCATTCTG CACACCCTGT ATCAGCAGGC GCTGGCCCAC
CAGGCGGAGT TCTTTATCGA GTACTTCGCC ATCGATTTGA TCATGGAGGA CGACCGTTGC
CGCGGGGTGG TTGCCCTTAA CCTGGCGGAC GGGACCATCC ACCGCTTTAT CGGTCAGATC
ACTGTGCTGG CCACCGGGGG GTACGGCCGG TCCTACTTCT CCTGCACCTC GGCCCATACC
TGCACCGGCG ACGGCAGCGG CATGGTGCTG CGGGCCGGCC TGCCGCTGCA GGACATGGAG
TTCGTGCAGT TCCACCCCAC CGGGGTTTAC GGCTCCGGCT GCCTGATCAC CGAGGGCGTG
CGCGGTGAGG GCGGTTACCT GACCAACTCC GAGGGTGAGC GTTTCATGGA GCGTTACGCG
CCCAACGCCA AGGACCTGGC CTCCCGCGAC GTGGTCAGCC GCTCGATGAC GGTGGAGATC
CGCGAGGGCC GGGGCGTGGG TCCGAAGAAG GACCATATCC ACCTGCACCT GGAGCACCTG
GGTGCCGAGG TTATCCACGA GCGGCTGCCC GGCATCGCCG AGACGGCGCG GATCTTCGCC
GGCGTGGATG TCACCAAGGA GCCGATCCCG GTTATCCCGA CGGTGCACTA CAACATGGGT
GGGATCCCCA CCAATTATCA GGGTGAGGTG GTCACCCTGA AGGATGGCAA CCCGGACCAG
GTGGTGCCGG GGCTGATGGC CATCGGTGAG GCGGCCTGCG TCTCGGTGCA CGGCGCCAAC
CGCCTGGGTT CCAACTCGCT GCTCGACCTG GTGGTGTTCG GCCGCGCCGC AGCCATCCGC
GCCGCTGAGC TCATCAAGGA GGGCGACACG GTGCAGCGGG CGCTGCAGCC GGGCGCCGGC
GACCTGGCGT TGGAGCGGCT CGAGCGGCTG CGTAACGCCA AGGGCAGCAA GCCCACCGCG
GAGATCCGCG ACGGCATGCA GGAGACCATG CAGAACTTCG CCGCGGTCTT CCGCACCGGC
GAGAGCCTGC AGGAGGGCTG TGAGCGCATG GCCGCCGTCT ATGCCTCCTT CGAGGACGTG
GCGGTGAGTG ACCGCAGCCT GATCTGGAAC TCCGATCTGG TGGAGACGCT GGAGCTGGAG
AACCTGCTGG GCAACGCGGT GGCGACCATT GAGTCCGCCC GCAACCGCGA AGAGAGCCGG
GGCGCGCATG CCCGCGAGGA CTTCCCGGAG CGTGACGACG ACAACTGGCA TAAGCACACC
CTGTCGTGGG TGGGCCAGGA CGGCAAGGTC AAGCTGGACT ACCGGCCGGT GCACATGTAC
ACGCTCACCG ATGAGATGGA AGTCATTCCG CCCAAGGCGC GTGTCTACTA G
 
Protein sequence
MAGDYKIIDH HYDVVVVGAG GAGLRATFGM AEKGLKTACV TKVFPTRSHT VAAQGGVSAA 
LGNMGEDDWR YHAYDTIKGS DWLGDQDAIE YMCREAIPAI IELEHYGVPF SRTEEGKIYQ
RPFGGMTVRY GEGTAQRTCA AADRTGHAIL HTLYQQALAH QAEFFIEYFA IDLIMEDDRC
RGVVALNLAD GTIHRFIGQI TVLATGGYGR SYFSCTSAHT CTGDGSGMVL RAGLPLQDME
FVQFHPTGVY GSGCLITEGV RGEGGYLTNS EGERFMERYA PNAKDLASRD VVSRSMTVEI
REGRGVGPKK DHIHLHLEHL GAEVIHERLP GIAETARIFA GVDVTKEPIP VIPTVHYNMG
GIPTNYQGEV VTLKDGNPDQ VVPGLMAIGE AACVSVHGAN RLGSNSLLDL VVFGRAAAIR
AAELIKEGDT VQRALQPGAG DLALERLERL RNAKGSKPTA EIRDGMQETM QNFAAVFRTG
ESLQEGCERM AAVYASFEDV AVSDRSLIWN SDLVETLELE NLLGNAVATI ESARNREESR
GAHAREDFPE RDDDNWHKHT LSWVGQDGKV KLDYRPVHMY TLTDEMEVIP PKARVY