| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1223 |
|---|
| Symbol | |
|---|
| ID | 4269754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1426186 |
|---|
| End bp | 1427754 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638125973 |
|---|
| Product | SpoVR family protein |
|---|
| Protein accession | YP_742062 |
|---|
| Protein GI | 114320379 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2719] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.297925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.137117 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC TGGAAGAGAG TGCCCGCCTG CTCTATCGCG GGCCGGACTG GGACTACCGC
AAGCTCAAGC GGGTCCACGA CGCCATCGAG CGCATTGCTC ATGAGGAGCT GGGCCTGGAC
ACCTACCCCA ACCAGATCGA GGTGATCAGC TCGGAGCAGA TGCTGGATGC CTACGCCAGC
CTGGGGATGC CGCTATTCTA CCGTCACTGG TCCTTCGGTA AGCACTTTGC CCGCGATGAG
ATGCACTACC GGAAGGGGCT GACCGGGCTG GCCTACGAGA TTGTGATCAA CTCCAGTCCC
TGCATCAGCT ACGTCATGGA AGAGAACACC ATGACCATGC AGACGCTGGT CATTGCCCAC
GCCGCCTTCG GCCACAACCA CTTCTTCAAG AACAACCAGC TCTTCCGTAC CTGGACGGAC
GCCGAGGGAA TTCTCGACTA CCTGGATTTC GCCAAGTCCT ATATCGCCCA GTGTGAGGAG
CGCTATGGGG TGCGGGAAGT CGAGCGGCTG CTCGATGCCG CCCACGCGTT GATGAGCCAT
GGGGTGCATC GCTTCCCGCG CCGCGGGCGT CTGAACCTGC GCCAGGAACG GGAGCGCGAA
GAGGAGCGGC GGCGCTACCT TGAGGCCACC TTCAACGACC TCTGGCGCAC GGTGCCCACC
CCGGAGTCCG GCGGTGAGGT CGACCCGGAG CTGCGGGCGC TGGAGGCGCG CCAGGAGCGA
CTCGGGCTGC CCGAGGAGAA CCTGCTCTAC TTCCTGGAGA AGCGTGCGCC GCGGTTACAG
CATTGGCAGC GGGAAGTCCT GCGCATCGTT CGCCAGGTGG CGCAGTACTT CTATCCCCAG
AAGCAGACCA AGGTCATGAA CGAGGGCTGT GCCACGACGG TGCACTACTA CATCATGAAC
CGGTTGCACG AGAGTGGCCG GATCGATGAT GGCGCCTACA TGGAGTTTCT GCACAATCAC
ACCAACGTGG TCACCCAACC GGAGTTCGAC GATCCGCGCT ACTCCGGCAT CAACCCTTAC
GCCCTGGGGT TCGATATCCT GCAGGACCTC AAGCGCATCT GCGAGGCCCC TACGGAGGAG
GATCGGCGCT GGTTCCCGGA TATCGCCGGC AACGGCGACC CCATTGGCAC CTGGAGGCAC
GCCTGGGCGG AGTATCGCGA CGAGAGCTTC ATCATGCAGT TTCTGAGCCC GCGGATGATG
CGGCGCTGGC GGCTGTTTCG TGTGCACAAC GACGCCGAGG ACCCGGATCT GGAGGTGACC
GCCATTCACG ACGAGGCCGG CTATCGCGAG CTGCGCAAGT CGTTGGCGGC CCAGTACGAC
CTGGCGCGGC ACGAGCCGGA CATCCAGGTG GTGGACGTGG ACTTGGTGGG GGACCGCAAG
TTGATCCTGG AACACCGGGT GGTGGACGGC GTGCTGCTGG ACGTGAGCAC CGGCATGCAG
GTGCTGAGGC ACTTGGCCAA TCTATGGGGT TACGCGGTCA TCCTGCAGGA GGTGGATGCG
GTCAGTGGCC GTGTGGTCAA CGAGTACCCG GAGGTCGCGC CCGACCACCC CTTCGTCAAC
GGGGCGTGA
|
|---|
| Protein sequence | MTELEESARL LYRGPDWDYR KLKRVHDAIE RIAHEELGLD TYPNQIEVIS SEQMLDAYAS
LGMPLFYRHW SFGKHFARDE MHYRKGLTGL AYEIVINSSP CISYVMEENT MTMQTLVIAH
AAFGHNHFFK NNQLFRTWTD AEGILDYLDF AKSYIAQCEE RYGVREVERL LDAAHALMSH
GVHRFPRRGR LNLRQERERE EERRRYLEAT FNDLWRTVPT PESGGEVDPE LRALEARQER
LGLPEENLLY FLEKRAPRLQ HWQREVLRIV RQVAQYFYPQ KQTKVMNEGC ATTVHYYIMN
RLHESGRIDD GAYMEFLHNH TNVVTQPEFD DPRYSGINPY ALGFDILQDL KRICEAPTEE
DRRWFPDIAG NGDPIGTWRH AWAEYRDESF IMQFLSPRMM RRWRLFRVHN DAEDPDLEVT
AIHDEAGYRE LRKSLAAQYD LARHEPDIQV VDVDLVGDRK LILEHRVVDG VLLDVSTGMQ
VLRHLANLWG YAVILQEVDA VSGRVVNEYP EVAPDHPFVN GA
|
|---|
| |