Gene Mlg_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1216 
Symbol 
ID4269747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1418313 
End bp1418651 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content63% 
IMG OID638125966 
Productprotein translocase subunit yajC 
Protein accessionYP_742055 
Protein GI114320372 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.366662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCT TCATCTCCCC TGCGATGGCG CAGGGTGGCG CGGACGGGGG TGGCGGCTTG 
AGTTTCCTGG TCTTCACCCT GGTGTTGATC GCCGTGTTCT GGTTTCTGGT GATCCGGCCG
CAGCAAAAAC GTGTGAAGGC CCACCGGGAG ATGCTCTCGG AACTCAAGGT GGACGATGAA
GTGGTCACCA ACGGGGGCGA CCTTGGCCGC ATCAACTGGC TGAATGACAA CTGGGTCGGC
CTGCAGGTGA CGCCGGAGCA GGAGTGGGTG GTGCAGCGCC AGCTGGTGGC TCACCAAATG
CCCAGGGGGA CGGTGGAGCA GTCCTGGGCA CAGGACTGA
 
Protein sequence
MDFFISPAMA QGGADGGGGL SFLVFTLVLI AVFWFLVIRP QQKRVKAHRE MLSELKVDDE 
VVTNGGDLGR INWLNDNWVG LQVTPEQEWV VQRQLVAHQM PRGTVEQSWA QD