Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_1187 |
Symbol | |
ID | 4270322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 1385122 |
End bp | 1388232 |
Gene Length | 3111 bp |
Protein Length | 1036 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638125936 |
Product | acriflavin resistance protein |
Protein accession | YP_742026 |
Protein GI | 114320343 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.359485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0265423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCCTTT CCGATATCTC CGTCAAACGC CCGGTACTGG CCACGGTGAT CAGTCTGGTC ATCGTGGTGC TGGGGGTGGC CTCGCTCAGC CAGCTACCGA TCCGGGAATA CCCGGACATC GACCCGCCCG TGGTGTCGGT CACCACCACC TATACCGGTG CCGCCCCCCA GGTCATTGAC ACCGAGATCA CCGAGGTGAT CGAGTCGGCG GTCAGCGGTG TCGACGGTAT CCGCACGATC ACCTCCGAGA GCCGTGATGG CCGCGGCCAG ACCACCATCG AGTTCCGCAC CAGCCGTGAT GTGGACAACG CCGCCAATGA CGTCCGTGAC GCCATCAACC GGACGTTGGA CGACCTGCCC AATGAGGCGG ACCAGCCGGT GGTGGCCAAG GCGGATGCCG ACGCCCGGCC GATGATGTGG ATCACCCTCA GCTCCGAGCG TTGGACGCCG GAGGAGGTCA GCGATTACGC GGAGCGCTTC CTGGTGGACC GCCTGTCGGT CCTCGATGGG GTCTCCGATA TCTTTATCGG CGGTGAGCGG CGCTACGCCA TGCGGGTGTG GCTGGACCGC CGTGCCATGG CGGCCCGCGG CATTACCGTG GCCGACGTGG AGAGCGCGCT GCGGGCGAAT AACGTGGAAC TGCCCGCGGG CCGGGTGGAG TCCCGGATGC GCGACCTCAC CGTGCGTACG GAGACCCGGC TGGCGGAGCC GGAGGAGTTC GCCAACCTGG TGATTCGGCG CACCGACGAC TACCTGGTCC GCCTCGGCGA GGTGGCCCAG GTGGAGCGGG GCGTGGAGGA CGACGACACC ACCGTGCGCA TGAACGACCA GACCGCCATC GGCCTGGGGA TTCTGCGCCA GTCCCAGGCC AATACCATCG CCGTCTCCGA CCGCGTGCAG GAGGAGATGG AGGCGATCCG CGCCTCGCTG CCCGAGGGTA TGGCGATGGA GGTGGGCTAC GATGAGTCCA TCTTTGTGCG CGATTCCATC CGCGAGGTGG TGCGCACCCT GCTTATCGCC GTGGGTCTGG TGATTCTCAC CATCTTCATC TTCCTGCGCA GTCTACGGGC CACCTTCATC CCCTCGGTGA CCATCCCGGT GGCGGTGATC GGGGCCTTCA CCGTGATGGC GCCCCTGGGC TTTTCGGTCA ACGTCCTGAC GCTTTTGGCG CTGATCCTCG CCATCGGACT GGTGGTGGAC GACGCCATTG TCATGCTGGA GAACATCCAG CGTCGGATCG ACGAGGGGGA ACCGCCTCTG TTGGCGGCCT ATCGGGGTGC CCGCCAGGTG GCCTTCGCCA TTATCGCTAC CACCGTCACC CTGATCGCCG TCTTCGTGCC CCTGTCCTTT ATGGAGGGCA ACGTTGGCCG ACTGTTCACG GAGTTCGGGT TCGTGCTGGC CGCGGCCGTG GCCTTCTCGT CGCTGGTGGC GTTGACCCTA GCGCCCATGC TCTGCTCCAA GTGGTTACGC AGCGGCACCG AGAACCCCGG GCGGTTGAAA CAGGCCACCG ATCGACTGTT CCAGGGGCTG ACCAACGGCT ACCGTTGGGT CCTGGAGCGT TCGTTGAAGA TGCCGGTGGT GGTGCTGGGG GTGGCCGCAC TGTTCGCGGG GACCGCCATC ACCCTGTTCC AGGCCCTGCC CCAGGAACTG ACACCGACCG AGGACCGCGG GGTGTTCATT GTGCCCGCCA CCGGGCCCCA GGGCGCCACC AGCGAGGCGC TGGATGAGAG TCTGCGGGAA CTCGAGGCGC TGCTGGCGCC CCTGCGCGAC GAGACCGGTG AGGCCTTTCG CATCCTCTCC ATCGGCGGGT TCCGCGGGGT CACCAACCGT GGTTTCGTCA TCGTCGGGCT GACCCCCTGG GGGGATCGCG ACCGCCGGCA GCAGGACATC GTCGCGGAGA TGATGCCACA GATCATGGGC GTCCCCGGGG TGCGGGCCTT TGCCGTCAAC CCGCCGGGGC TGGGGCAGAG CGGCTTCCAG CAACCGGTCC AGTTCGTGAT CGGCGGGCCC GACTACGAGG ATGTGGCCGA GTGGGGCGAG CGGGTCATGG CGCGCGTGCG CGAAGAGAAC CCCCGGCTGG TCAATCTGGA TATGGACTAC GAGGAGACCC GGCCGCAGGT TCAGGTCCAG GTCAACCGCG CCCGCGCCTC GGACCTGGAG ATCCCCATCG ATGTGATCGG CGGGACGTTG CAGACCATGA TGGCCTCGCG GGAGGTGACC ACCTATCTCG ATCGCGGGCG CGAGTACCAA GTGGTGTTGC AGGCGGGAGA CGAGGCCCGG GCCAGCCCCG ATGACCTCAG CCATATCTTC GTGCGGGCGG GGGTCAACGG GGAACTGATC TCGCTGTCCA GCCTGCTCAC CCTGCGCGAG GAGGGCTCGC CGCCCACCCT CAACCGGGTG GGCCGGCTGC CGGCGGTCAC CCTCACCGCC TCGTTGGCGG ACGGCTACGA TCTGGGCAGC GCGCTGGAGT ACCTAAATCG GGTGGCGGCC GAGGAGTTGC CGCCGGAGTC CCGGATCAGC TACCTGGGAC TGTCCGAGGA GTTCATGGAG ACCTCCGGGG CGCTGGTGCT GACCTTCGCC CTGGCGTTGT TGATCGTCTT CCTGGTCCTG TCGGCCCAGT TCGAGAGCTT CATCCATCCG CTGATCATCC TGGTGGCGGT GCCGCTGGCG GTGACCGGGG CGCTGGCGGC ATTGTTCGTC GGTGGCCTGA CGCTGAATAT CTATAGCCAG ATCGGTATGA TCCTGCTGAT CGGGTTGATG GCGAAGAACG GGATCCTCAT CGTCGAGTTC GCCAACCAGA TGCGGGATCG GGGGATGACC GTGCGCGAGG CCATCCTGGA GGGCGCCACC CTGCGTTTCC GGCCGGTGCT GATGACCGCC ATTTCTACTA TCTTCGGGGC CCTGCCGCTG GTGCTGGCTT TCGGCGCCGG CGCTGAAAGC CGGATGGCCA TCGGTACGGT CATTATCGGT GGTATGAGCT TTGCCTCCCT GCTGACGCTG GTGGTCATCC CGGTGCTGTA CGACCTGTTG GCGCGCTTCA CCCGTCCGGT GAACGCCGTG GCGGAGGAGC TCAAGGCGCT GGGGGCGGAG GAGAGCGCCT ACACCCGGTA A
|
Protein sequence | MVLSDISVKR PVLATVISLV IVVLGVASLS QLPIREYPDI DPPVVSVTTT YTGAAPQVID TEITEVIESA VSGVDGIRTI TSESRDGRGQ TTIEFRTSRD VDNAANDVRD AINRTLDDLP NEADQPVVAK ADADARPMMW ITLSSERWTP EEVSDYAERF LVDRLSVLDG VSDIFIGGER RYAMRVWLDR RAMAARGITV ADVESALRAN NVELPAGRVE SRMRDLTVRT ETRLAEPEEF ANLVIRRTDD YLVRLGEVAQ VERGVEDDDT TVRMNDQTAI GLGILRQSQA NTIAVSDRVQ EEMEAIRASL PEGMAMEVGY DESIFVRDSI REVVRTLLIA VGLVILTIFI FLRSLRATFI PSVTIPVAVI GAFTVMAPLG FSVNVLTLLA LILAIGLVVD DAIVMLENIQ RRIDEGEPPL LAAYRGARQV AFAIIATTVT LIAVFVPLSF MEGNVGRLFT EFGFVLAAAV AFSSLVALTL APMLCSKWLR SGTENPGRLK QATDRLFQGL TNGYRWVLER SLKMPVVVLG VAALFAGTAI TLFQALPQEL TPTEDRGVFI VPATGPQGAT SEALDESLRE LEALLAPLRD ETGEAFRILS IGGFRGVTNR GFVIVGLTPW GDRDRRQQDI VAEMMPQIMG VPGVRAFAVN PPGLGQSGFQ QPVQFVIGGP DYEDVAEWGE RVMARVREEN PRLVNLDMDY EETRPQVQVQ VNRARASDLE IPIDVIGGTL QTMMASREVT TYLDRGREYQ VVLQAGDEAR ASPDDLSHIF VRAGVNGELI SLSSLLTLRE EGSPPTLNRV GRLPAVTLTA SLADGYDLGS ALEYLNRVAA EELPPESRIS YLGLSEEFME TSGALVLTFA LALLIVFLVL SAQFESFIHP LIILVAVPLA VTGALAALFV GGLTLNIYSQ IGMILLIGLM AKNGILIVEF ANQMRDRGMT VREAILEGAT LRFRPVLMTA ISTIFGALPL VLAFGAGAES RMAIGTVIIG GMSFASLLTL VVIPVLYDLL ARFTRPVNAV AEELKALGAE ESAYTR
|
| |