Gene Mlg_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1187 
Symbol 
ID4270322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1385122 
End bp1388232 
Gene Length3111 bp 
Protein Length1036 aa 
Translation table11 
GC content66% 
IMG OID638125936 
Productacriflavin resistance protein 
Protein accessionYP_742026 
Protein GI114320343 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.359485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0265423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCTTT CCGATATCTC CGTCAAACGC CCGGTACTGG CCACGGTGAT CAGTCTGGTC 
ATCGTGGTGC TGGGGGTGGC CTCGCTCAGC CAGCTACCGA TCCGGGAATA CCCGGACATC
GACCCGCCCG TGGTGTCGGT CACCACCACC TATACCGGTG CCGCCCCCCA GGTCATTGAC
ACCGAGATCA CCGAGGTGAT CGAGTCGGCG GTCAGCGGTG TCGACGGTAT CCGCACGATC
ACCTCCGAGA GCCGTGATGG CCGCGGCCAG ACCACCATCG AGTTCCGCAC CAGCCGTGAT
GTGGACAACG CCGCCAATGA CGTCCGTGAC GCCATCAACC GGACGTTGGA CGACCTGCCC
AATGAGGCGG ACCAGCCGGT GGTGGCCAAG GCGGATGCCG ACGCCCGGCC GATGATGTGG
ATCACCCTCA GCTCCGAGCG TTGGACGCCG GAGGAGGTCA GCGATTACGC GGAGCGCTTC
CTGGTGGACC GCCTGTCGGT CCTCGATGGG GTCTCCGATA TCTTTATCGG CGGTGAGCGG
CGCTACGCCA TGCGGGTGTG GCTGGACCGC CGTGCCATGG CGGCCCGCGG CATTACCGTG
GCCGACGTGG AGAGCGCGCT GCGGGCGAAT AACGTGGAAC TGCCCGCGGG CCGGGTGGAG
TCCCGGATGC GCGACCTCAC CGTGCGTACG GAGACCCGGC TGGCGGAGCC GGAGGAGTTC
GCCAACCTGG TGATTCGGCG CACCGACGAC TACCTGGTCC GCCTCGGCGA GGTGGCCCAG
GTGGAGCGGG GCGTGGAGGA CGACGACACC ACCGTGCGCA TGAACGACCA GACCGCCATC
GGCCTGGGGA TTCTGCGCCA GTCCCAGGCC AATACCATCG CCGTCTCCGA CCGCGTGCAG
GAGGAGATGG AGGCGATCCG CGCCTCGCTG CCCGAGGGTA TGGCGATGGA GGTGGGCTAC
GATGAGTCCA TCTTTGTGCG CGATTCCATC CGCGAGGTGG TGCGCACCCT GCTTATCGCC
GTGGGTCTGG TGATTCTCAC CATCTTCATC TTCCTGCGCA GTCTACGGGC CACCTTCATC
CCCTCGGTGA CCATCCCGGT GGCGGTGATC GGGGCCTTCA CCGTGATGGC GCCCCTGGGC
TTTTCGGTCA ACGTCCTGAC GCTTTTGGCG CTGATCCTCG CCATCGGACT GGTGGTGGAC
GACGCCATTG TCATGCTGGA GAACATCCAG CGTCGGATCG ACGAGGGGGA ACCGCCTCTG
TTGGCGGCCT ATCGGGGTGC CCGCCAGGTG GCCTTCGCCA TTATCGCTAC CACCGTCACC
CTGATCGCCG TCTTCGTGCC CCTGTCCTTT ATGGAGGGCA ACGTTGGCCG ACTGTTCACG
GAGTTCGGGT TCGTGCTGGC CGCGGCCGTG GCCTTCTCGT CGCTGGTGGC GTTGACCCTA
GCGCCCATGC TCTGCTCCAA GTGGTTACGC AGCGGCACCG AGAACCCCGG GCGGTTGAAA
CAGGCCACCG ATCGACTGTT CCAGGGGCTG ACCAACGGCT ACCGTTGGGT CCTGGAGCGT
TCGTTGAAGA TGCCGGTGGT GGTGCTGGGG GTGGCCGCAC TGTTCGCGGG GACCGCCATC
ACCCTGTTCC AGGCCCTGCC CCAGGAACTG ACACCGACCG AGGACCGCGG GGTGTTCATT
GTGCCCGCCA CCGGGCCCCA GGGCGCCACC AGCGAGGCGC TGGATGAGAG TCTGCGGGAA
CTCGAGGCGC TGCTGGCGCC CCTGCGCGAC GAGACCGGTG AGGCCTTTCG CATCCTCTCC
ATCGGCGGGT TCCGCGGGGT CACCAACCGT GGTTTCGTCA TCGTCGGGCT GACCCCCTGG
GGGGATCGCG ACCGCCGGCA GCAGGACATC GTCGCGGAGA TGATGCCACA GATCATGGGC
GTCCCCGGGG TGCGGGCCTT TGCCGTCAAC CCGCCGGGGC TGGGGCAGAG CGGCTTCCAG
CAACCGGTCC AGTTCGTGAT CGGCGGGCCC GACTACGAGG ATGTGGCCGA GTGGGGCGAG
CGGGTCATGG CGCGCGTGCG CGAAGAGAAC CCCCGGCTGG TCAATCTGGA TATGGACTAC
GAGGAGACCC GGCCGCAGGT TCAGGTCCAG GTCAACCGCG CCCGCGCCTC GGACCTGGAG
ATCCCCATCG ATGTGATCGG CGGGACGTTG CAGACCATGA TGGCCTCGCG GGAGGTGACC
ACCTATCTCG ATCGCGGGCG CGAGTACCAA GTGGTGTTGC AGGCGGGAGA CGAGGCCCGG
GCCAGCCCCG ATGACCTCAG CCATATCTTC GTGCGGGCGG GGGTCAACGG GGAACTGATC
TCGCTGTCCA GCCTGCTCAC CCTGCGCGAG GAGGGCTCGC CGCCCACCCT CAACCGGGTG
GGCCGGCTGC CGGCGGTCAC CCTCACCGCC TCGTTGGCGG ACGGCTACGA TCTGGGCAGC
GCGCTGGAGT ACCTAAATCG GGTGGCGGCC GAGGAGTTGC CGCCGGAGTC CCGGATCAGC
TACCTGGGAC TGTCCGAGGA GTTCATGGAG ACCTCCGGGG CGCTGGTGCT GACCTTCGCC
CTGGCGTTGT TGATCGTCTT CCTGGTCCTG TCGGCCCAGT TCGAGAGCTT CATCCATCCG
CTGATCATCC TGGTGGCGGT GCCGCTGGCG GTGACCGGGG CGCTGGCGGC ATTGTTCGTC
GGTGGCCTGA CGCTGAATAT CTATAGCCAG ATCGGTATGA TCCTGCTGAT CGGGTTGATG
GCGAAGAACG GGATCCTCAT CGTCGAGTTC GCCAACCAGA TGCGGGATCG GGGGATGACC
GTGCGCGAGG CCATCCTGGA GGGCGCCACC CTGCGTTTCC GGCCGGTGCT GATGACCGCC
ATTTCTACTA TCTTCGGGGC CCTGCCGCTG GTGCTGGCTT TCGGCGCCGG CGCTGAAAGC
CGGATGGCCA TCGGTACGGT CATTATCGGT GGTATGAGCT TTGCCTCCCT GCTGACGCTG
GTGGTCATCC CGGTGCTGTA CGACCTGTTG GCGCGCTTCA CCCGTCCGGT GAACGCCGTG
GCGGAGGAGC TCAAGGCGCT GGGGGCGGAG GAGAGCGCCT ACACCCGGTA A
 
Protein sequence
MVLSDISVKR PVLATVISLV IVVLGVASLS QLPIREYPDI DPPVVSVTTT YTGAAPQVID 
TEITEVIESA VSGVDGIRTI TSESRDGRGQ TTIEFRTSRD VDNAANDVRD AINRTLDDLP
NEADQPVVAK ADADARPMMW ITLSSERWTP EEVSDYAERF LVDRLSVLDG VSDIFIGGER
RYAMRVWLDR RAMAARGITV ADVESALRAN NVELPAGRVE SRMRDLTVRT ETRLAEPEEF
ANLVIRRTDD YLVRLGEVAQ VERGVEDDDT TVRMNDQTAI GLGILRQSQA NTIAVSDRVQ
EEMEAIRASL PEGMAMEVGY DESIFVRDSI REVVRTLLIA VGLVILTIFI FLRSLRATFI
PSVTIPVAVI GAFTVMAPLG FSVNVLTLLA LILAIGLVVD DAIVMLENIQ RRIDEGEPPL
LAAYRGARQV AFAIIATTVT LIAVFVPLSF MEGNVGRLFT EFGFVLAAAV AFSSLVALTL
APMLCSKWLR SGTENPGRLK QATDRLFQGL TNGYRWVLER SLKMPVVVLG VAALFAGTAI
TLFQALPQEL TPTEDRGVFI VPATGPQGAT SEALDESLRE LEALLAPLRD ETGEAFRILS
IGGFRGVTNR GFVIVGLTPW GDRDRRQQDI VAEMMPQIMG VPGVRAFAVN PPGLGQSGFQ
QPVQFVIGGP DYEDVAEWGE RVMARVREEN PRLVNLDMDY EETRPQVQVQ VNRARASDLE
IPIDVIGGTL QTMMASREVT TYLDRGREYQ VVLQAGDEAR ASPDDLSHIF VRAGVNGELI
SLSSLLTLRE EGSPPTLNRV GRLPAVTLTA SLADGYDLGS ALEYLNRVAA EELPPESRIS
YLGLSEEFME TSGALVLTFA LALLIVFLVL SAQFESFIHP LIILVAVPLA VTGALAALFV
GGLTLNIYSQ IGMILLIGLM AKNGILIVEF ANQMRDRGMT VREAILEGAT LRFRPVLMTA
ISTIFGALPL VLAFGAGAES RMAIGTVIIG GMSFASLLTL VVIPVLYDLL ARFTRPVNAV
AEELKALGAE ESAYTR