| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1154 |
|---|
| Symbol | |
|---|
| ID | 4270660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1351843 |
|---|
| End bp | 1354173 |
|---|
| Gene Length | 2331 bp |
|---|
| Protein Length | 776 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638125903 |
|---|
| Product | penicillin-binding protein 1B |
|---|
| Protein accession | YP_741993 |
|---|
| Protein GI | 114320310 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGAT CACGTCAGAG CCGGCGCAGG GCCACCGGGC GGGGGCGCCC CGGGCGTTTG
AAGCGCTGGG GCGCGCGTCT GCTGGGCCTG CTGGTCACGG TCGCCCTGGT GGCGGTGGGC
CTGCTGGCCT TGTACGCCAA GTCGCTGGAG CCGGAGCTGC GCCAGCATTT TGAGGGCGGC
CGGTGGGCGG TCCCGGCCCG GGTCTACGCC CGCCCCCTGG AGCTTTACGC CGGCAAGGCC
CTGTCGCCGG TGGAGCTGCA GGTGGAGCTT GAGGAGCTGG GCTACCGGCA GACGACGTCG
GGGCGCCAAC CGGGGAGTTG GAGCCGAAAC GGCGCGGTTT TCCACCTGAG TACGCGCGGC
TTTGCCCACC CCGACGGTGA GGAGCCGGCC CGTAGCCTGC GCCTGGCCTT CGATGGGGGG
CAGCTGGCCT CGGTGACGGG GTTGGATGAC CGGGAGCGGG TCGGTCTGGC GCGTCTGGAG
CCGGCGGTGG TCGGCAGCCT GCACGCGCCC CATCAGGAGG ACCGCTTGCT GGTCCGGCTC
GAGCAGGTGC CGGAGACCCT GGTCCGGGCC CTGCTGGTGG TGGAGGACCG CAAGTTCTTC
GACCACCACG GCCTCTCCCT CACCGGCATC GCCCGGGCCG CCCTGGCCAA TCTGCGGGCC
GGCCGGGTGG TGCAGGGGGG CAGCACCCTG ACCCAGCAGC TGGTCAAAAA CTTCTACCTC
AGTGCCGATC AGACCCTGCG GCGCAAGTTC ACCGAGGCGG TGATGGCGCT GCTCCTGGAG
CATTACTACG AGAAGGACGA GATCCTGGAG GCCTACTTTA ACGAGGTCTT TCTCGGGCAG
CGCGGCGGGC GGGGCGTCCA CGGTTTCGGA TTGGGTGCCG AGTTCTACTT CGGGCGTCCC
CTGGATGAGC TCAGCCTCGC CCAGCAGGCC ACGCTGGTGG GGATGGTGCG CGGACCCTCG
CACTATAACC CGCGCCGCCA CCCGGAGCGG GCGCGGGAGC GACGGAATCT GGTGCTCACG
TTGATGGCGC GTCACGGCAT TATCCCGGGG GACGAGGCGC GGGAGGCCAT GGCGGAGGAT
CTGGGGGTCG TGGCCGACGG TCAGCGCCAC CAAGGGCGTT ATCCCGCCTT CATGGACCTG
GTGCGCCGCC ACCTGCAACG GGATTACCGC CGGGAGGACC TGATCAGCGA GGGGCTGCAT
GTACACACCA CGCTGGCGCC GCGGGTCCAG CGTGCCGCGG AGCGGGCGGT GGACAGCCGC
CTGGCCGCAT TCGGTGCGGA AGGATTGCAG GCGGCGCTGG TGTCGGTCTC GGTGGAGGAT
GGCGAGGTCA AGGCCGTGGT CGGGGGCGCG GACTACCGCT ACGCCGGCTT CAACCGGGCC
CTGGATGCCC GCCGCCCCAT CGGCTCACTG GTCAAGCCGG CGGTCTATCT GGCGGCCCTG
CGGGAACCGG GGCAGTACGC CCTGGGGACC GTGCTCAGCG ACGAGCCGGT CACCCTCCGG
GATCGCGAGG GCGAGCCCTG GACGCCGCGC AATTACGATG GCGATCACCG GGGTGAGGTG
CCGTTATGGG AGGCGCTGTC CGACTCGCTC AACGTGCCCA CGGTGCGTCT CAGCCAGGGG
CTGGGCCTGC GCCGGGTGGC CCGCACCTGG GCTGACCTGG GCGGCCGCGT CCCCAACACC
CTGTACCCCT CGTTCGTGCT GGGTGCCAGC GAACACAGCG TGTTGGAGAT GGCGCAGGTC
TATCAGACCA TCGCCGCCGA GGGCTTCCGG ACCCCGCTGC GGGCGGTGCG GGCGGTCACC
GACAGCGACG GCGAGCTGCT CTCCCGCTAT CCCCTGGCCA CCGAACAGGC GGTCGATCCG
GCCAGCAGTT ACCTGTTGCA GCATGCCCTG GAGCAGGTGG TGGCGCGGGG CACCGCGCGC
GGGTTGCGGT CCTGGTTGGG CGACACCCAC GGCCTTGCGG GCAAGACCGG AACCACCGAC
GATTACCGGG ACGCGTGGTA CGCGGGCTAC TCCGGGGATC TGCTCTCGGT GGTCTGGTTG
GGGCGGGACG ACAATCAACC GATCGGGCTC ACCGGCAGTG GCGGGGCGAT GCCCGTCTGG
GGCGAGCAGT TTCAGGCATT GAGCTTCCGC CGCCTGAACC GCCTGCCCCC CGCTGGCGTG
GAGGAGGCCT GGATCGATTA CCGGACCGGG CGGCGCAGTG GCCCGGACTG TGACGGGGCG
GTGGCGCTGC CCTATATCAG CGGGCACCTG CCGGCGGAGT CGGTGGTCTG TGCCCGCGAG
CCGGACGACG ACGACCGACG GGGCTTCTGG GATCGCGTCT TCCGGCGCTG A
|
|---|
| Protein sequence | MKRSRQSRRR ATGRGRPGRL KRWGARLLGL LVTVALVAVG LLALYAKSLE PELRQHFEGG
RWAVPARVYA RPLELYAGKA LSPVELQVEL EELGYRQTTS GRQPGSWSRN GAVFHLSTRG
FAHPDGEEPA RSLRLAFDGG QLASVTGLDD RERVGLARLE PAVVGSLHAP HQEDRLLVRL
EQVPETLVRA LLVVEDRKFF DHHGLSLTGI ARAALANLRA GRVVQGGSTL TQQLVKNFYL
SADQTLRRKF TEAVMALLLE HYYEKDEILE AYFNEVFLGQ RGGRGVHGFG LGAEFYFGRP
LDELSLAQQA TLVGMVRGPS HYNPRRHPER ARERRNLVLT LMARHGIIPG DEAREAMAED
LGVVADGQRH QGRYPAFMDL VRRHLQRDYR REDLISEGLH VHTTLAPRVQ RAAERAVDSR
LAAFGAEGLQ AALVSVSVED GEVKAVVGGA DYRYAGFNRA LDARRPIGSL VKPAVYLAAL
REPGQYALGT VLSDEPVTLR DREGEPWTPR NYDGDHRGEV PLWEALSDSL NVPTVRLSQG
LGLRRVARTW ADLGGRVPNT LYPSFVLGAS EHSVLEMAQV YQTIAAEGFR TPLRAVRAVT
DSDGELLSRY PLATEQAVDP ASSYLLQHAL EQVVARGTAR GLRSWLGDTH GLAGKTGTTD
DYRDAWYAGY SGDLLSVVWL GRDDNQPIGL TGSGGAMPVW GEQFQALSFR RLNRLPPAGV
EEAWIDYRTG RRSGPDCDGA VALPYISGHL PAESVVCARE PDDDDRRGFW DRVFRR
|
|---|
| |