| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1145 |
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| Symbol | |
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| ID | 4269640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1340275 |
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| End bp | 1342395 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638125894 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_741984 |
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| Protein GI | 114320301 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATAG ACAACGGACT GTACCTCGCC CTCTCGCGCC CCGGCGCGGC AGAGGCCGAC
CTGCCCCGGG TCACCGGGTT CACCCTGGAT GAGCACCTCT CCCGGCCCTT CACGCTGACC
CTGGACCTGG TCCACCCCTC GCCCGATCTC GCCCCCGACG ACTGGCTTGA GCAGGGCCTG
GCACTGGCCA TCCATCAGGC CGGCCGCGTC ACCCGCCGGG TCCACGGCGT GGTCACCGAG
TTCCAGCGCG GCCGCACCGG CGCCCGGCGC ACCGCCTACC AACTGGTCGT CCGCCCCGCC
CTCTGGCGCC TTGCCCTGCG CCGCAACGCC CGCATCTTCC AGCACGCCTG CCCGCTGGAT
GTCCTCCACA CCCTGCTTTC GGAACATGGC ATCACCGACG CCGCCTTCGC CGTCCGCCAC
CGCCCCGAGC CCCGCGAGTA CCTGGTGCAG TACCGGGAGA GCGACCTGGC CTTTGTCCAG
CGGCTTGCCG CCGAGTTGGG CATCGTCTAC TTCCACGAGT TCGACGACAC CCCCGAGGGC
GGCCACCGCC CGGTGTTCAC CGATACCCAC CGGGGGCTGG GGCAGGCGGG CGAATGGGCC
TACCGCCCCC GCGCCGGCGG CGTGGCCGAG GCCCGCCATG TGCACACCCT GCGCGAGGCC
CACCGGGTGC GCGCGCAGCG CGCCACCCTG GAGGATCGCC ATTTCCGCAC CCCCCGGCGG
CGGCTGATCC ACGCGCAGGC GGTGGATGGG GCAGCCGGGC ATGATGGCGC CGAGTCGGGG
GCCACCCCCT ACGAGCACTA CGACCACCCC GGCCGGTTCA AGAGCGAGAC CAGCGGCCGG
GCCTTCACCC GGGTCCGGCT CGGCCAGTTG CGCGCCGACG CCCACACCGC CGAGGCCGAA
AGCGATATTG CCGAGCTGCG CCCCGGCGTG CGCTTCACCC TCGATGGCCA CGACGCCGGC
GAACGGCGCC GCGACTGGCA GGTGGTCGGC GCCCTTCATA CCGCCCGGCA GCCCGCCGCG
CTGGAAGAGG ACGCGATCCT GCTGGCCGAC GAGGACGAGG CAGGCGTGGC CCGGCTGAAC
AACCGGCTCA CCCTCGTGCC CGCCGACACC GACTGGCGCC CGCCCCACGA CCCGGGCGCC
GGCCCGCGGA TGGAGGGCCC GCAGATCGCC CGGGTGGTGG GCCCCGAGGG GGAGGCGATC
CATTGCGATG AGCACGGCCG GGTCAAGGTC CGTTTCCCCT GGGACCGCTA CGCCGCCGAC
GACGAGCACG CCAGCGCCTG GCTGCGCGTC GCCCAGCCCT GGGCCGGGCC CGGCTACGGC
GGGCTGTTCC TGCCCCGGGT GGGCCATGCG GTGATTGTCG ACTTCATGGC CGGCGACCCG
GACCAGCCGG TGATCACCGG CCGGGTCTAC GATGGCCACA ACACCCCGCC CTATCCGCTG
CCCGAGCACA AGACCCGCAG CGTGCTGCGC AGTCGCAGCC ACGGCGGCGA GGGCTACAAC
GAACTGCACT TCGAGGACGC CCACGACGCC GAGCGCATCC ACCTGCACGC CCAGCGCGAT
CTCGACCTGC ACACCCGCAA CGACCGCTCC GAGACCATCG GCCGGCACAG CCACCTGGGC
GTCCACGGCG ACCGGCTCGC GGAGATCCAC GGCGACGAGC ACCTCACCGT GCAGGGCGAG
CGGCGCGAGC GCACCGGTGG GGATCAGCAT CTCAGCGTGG AGGGCACGCT CCATCAATAC
CAAGGCGAGT GCCTTTTGGT GGAGGCTGGG CACGAGATCC ACCATGCCGC CGGGGTCAAG
CTGATCCTGG AGGCCGGTGC CGAGATCACC CTCCGGGCCG GCGGCAGCTT CATCAAGCTC
GACCCCTCCG GCATCACCCT CAGCGGCCCC GGCATCCGTA TAAACTCCGG AGGCAGCCCG
GGCTCGGGGA GTGCACAGCG GGCCCAGACG CCCGCACGGC CGGGGCACGT GCCGGCCGAA
CCGCCCCCAC GAGTCGTAAA GGGCGTTGGC CCGGACCCCG AGCGCTATGC ACGCAGCGAG
GCCGCCCGCA TTCAATTGTG TGGCAAGGAC ACGGAGTCCG GTAACTGTTC CAGGGAGGAA
TGCCCGTGCA CGAGTGGCTG A
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| Protein sequence | MPIDNGLYLA LSRPGAAEAD LPRVTGFTLD EHLSRPFTLT LDLVHPSPDL APDDWLEQGL
ALAIHQAGRV TRRVHGVVTE FQRGRTGARR TAYQLVVRPA LWRLALRRNA RIFQHACPLD
VLHTLLSEHG ITDAAFAVRH RPEPREYLVQ YRESDLAFVQ RLAAELGIVY FHEFDDTPEG
GHRPVFTDTH RGLGQAGEWA YRPRAGGVAE ARHVHTLREA HRVRAQRATL EDRHFRTPRR
RLIHAQAVDG AAGHDGAESG ATPYEHYDHP GRFKSETSGR AFTRVRLGQL RADAHTAEAE
SDIAELRPGV RFTLDGHDAG ERRRDWQVVG ALHTARQPAA LEEDAILLAD EDEAGVARLN
NRLTLVPADT DWRPPHDPGA GPRMEGPQIA RVVGPEGEAI HCDEHGRVKV RFPWDRYAAD
DEHASAWLRV AQPWAGPGYG GLFLPRVGHA VIVDFMAGDP DQPVITGRVY DGHNTPPYPL
PEHKTRSVLR SRSHGGEGYN ELHFEDAHDA ERIHLHAQRD LDLHTRNDRS ETIGRHSHLG
VHGDRLAEIH GDEHLTVQGE RRERTGGDQH LSVEGTLHQY QGECLLVEAG HEIHHAAGVK
LILEAGAEIT LRAGGSFIKL DPSGITLSGP GIRINSGGSP GSGSAQRAQT PARPGHVPAE
PPPRVVKGVG PDPERYARSE AARIQLCGKD TESGNCSREE CPCTSG
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