| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1089 |
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| Symbol | |
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| ID | 4270034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1270228 |
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| End bp | 1271100 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638125841 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_741931 |
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| Protein GI | 114320248 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.164298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGCG ATAATACCGC CATGTCTGAA CAAGCAAACA CCGAAAAACT GCAGAAGGTG
CTGGCCCGCG CCGGGGTCGG CTCCCGCCGG CAGATGGAGG CCTGGATCGC CGAGGGGCGG
GTCAAGGTCA ACGGCCACGT TGCCCAACTG GGCGACCGGG TCACCGCCGA GGACCGGCTG
CAGGTGGACG GCCGGCCGGT GGCCCGGCGC AAGCTCCAGC CGGAGCGCCG GGTGCTGCTC
TACTACAAGC CGGAGGGGCA GGTCTGCACC CGTGACGACC CCGAGGGGCG GCCCACGGTC
TTTGAGAACC TGCCCGAGGC GGATGGCCGT TGGGTGGTGG TGGGCCGGCT GGACCTGAAC
AGCCAGGGCC TGCTGTTATT CACCACCGAC GGGGAACTGG CCAATCGGCT CATGCACCCG
TCCAGCGGCA TCGAGCGGGA ATACGCGGTG CGGGTTTACG GCGAGGTCAC CCCCGAGATC
CTGCGCCGGC TCCAGCAGGG CGTTACCCTG GACGACGGTG AGGCGGCCTT CACCCGCATC
ACGCCGGTCG TGGATTATAG GGCCCTGGGC TATGAGGCCC CGCCCGGCAA CGAGTGGTAC
CAGGTCACCC TGCGCGAGGG CCGTAACCGC GAGGTGCGCC GCCTCTGGGA GTCCCAGGGC
CTGAAGGTGA GCCGGCTGAT CCGGGTGCGC TACGGGCCGG TGAGCCTGCC GCGGGGGCTG
CGTCGGGGCG AGCACCGGCC CCTGCGCGAG GGGCAGGTGG CCGCCCTCTG CCAGGCGGTG
GGGTTGGAAC ACGAAACCCA AAAAGACAAC GACAAACGCA AGGCCCCCCG GCACAAGGGG
CGGCGCGGCA GAAGGCCCAC CCGGCGCCGC TGA
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| Protein sequence | MPGDNTAMSE QANTEKLQKV LARAGVGSRR QMEAWIAEGR VKVNGHVAQL GDRVTAEDRL
QVDGRPVARR KLQPERRVLL YYKPEGQVCT RDDPEGRPTV FENLPEADGR WVVVGRLDLN
SQGLLLFTTD GELANRLMHP SSGIEREYAV RVYGEVTPEI LRRLQQGVTL DDGEAAFTRI
TPVVDYRALG YEAPPGNEWY QVTLREGRNR EVRRLWESQG LKVSRLIRVR YGPVSLPRGL
RRGEHRPLRE GQVAALCQAV GLEHETQKDN DKRKAPRHKG RRGRRPTRRR
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