| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1056 |
|---|
| Symbol | |
|---|
| ID | 4270529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1228870 |
|---|
| End bp | 1229415 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638125807 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | YP_741898 |
|---|
| Protein GI | 114320215 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3038] Cytochrome B561 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.52465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.404456 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATATG CACCGAATGA TCAGTACAGC TCGCCCTCCA AAGTCCTGCA TTGGTTGAGC
GCTTTTCTCA TCATTGCACT CATCGCCGTG GGGTGGTGGA TGACCGGGCT GTCGGAGGAC
AACCCCATCC GCGGCAATGT CTATAACCTG CACAAAGCAC TTGGTGCCAT TACGGTGGTC
TTGTTGATAG CGCGCCTGGC GTGGTTCCGG GTCCAGCCCC CGCCGGGGCC AGTCTCCGCA
TTGCCACGCC CGTTGCGGCG GCTGAACGTG ACGGTGAAGG TTCTACTCTA CGCCCTGATG
CTGGTAGTGC CGCTCAGCGG TTACGTCATG TCCAATGCCG CCGGCCATCC GGTTTCGATG
TTCGGGTTGT TCAGCCTGCC TTCGCTGGTG CCCGAGAGTC GTGGCCTGGC GGGAGCGGCG
AGCACCCTGC ACACCTGGTC GGCCTATGTG CTGCTGGCGC TGATCGGGGT CCACGTGGCC
GGGTCGGTTA AACACCGGCT TACCGACCGT GGTGGCCCTA CGGATGTTCT TCAGCGGATG
ACCTGA
|
|---|
| Protein sequence | MSYAPNDQYS SPSKVLHWLS AFLIIALIAV GWWMTGLSED NPIRGNVYNL HKALGAITVV
LLIARLAWFR VQPPPGPVSA LPRPLRRLNV TVKVLLYALM LVVPLSGYVM SNAAGHPVSM
FGLFSLPSLV PESRGLAGAA STLHTWSAYV LLALIGVHVA GSVKHRLTDR GGPTDVLQRM
T
|
|---|
| |