Gene Mlg_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1000 
Symbol 
ID4268368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1135365 
End bp1136060 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content62% 
IMG OID638125751 
Productrespiratory nitrate reductase gamma subunit 
Protein accessionYP_741843 
Protein GI114320160 
COG category[C] Energy production and conversion 
COG ID[COG2181] Nitrate reductase gamma subunit 
TIGRFAM ID[TIGR00351] respiratory nitrate reductase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCCA CATACCTTCA CGACCTGGCG TTCGCGGTGT TTCCCTACAT CGCAGGGACG 
GTGTTCCTGA TAGGGAGTCT GCTGCGCTTT GAGAAGAGCC AGTACACCTG GAAGAGCAAC
ACCACCCAGC TGATGTCCGG TGGCCCCCGT TTCCGCCTGG GGATCAACCT CTTCCACATC
GGCATCATCG GGCTGTTCCT CGGCCACTTC TTCGGTCTGC TCACACCGCA AGCCATCTAC
AGCGCAGTGG GTCTGACCGC CGGCGCTAAG CAGGTGCTGG CCATCGTGGC CGGCGGTATC
TTCGGCATCA TCACCCTGGT GGGCGTGGCC ATCCTGCTGC ACCGGCGGTT CACCGACCCG
CGGGTGCGGC GGACCAGCTA CCCCATGGAC TCGTTCATTC TGGTCCTGCT GGCCGCCCAG
CTGCTCACCG GCCTGCTGAC GATCCCAATC TCCATGGGCC ACCTGGACGG CGGCACCATG
CTGCAGATCG TTGCCTGGGC ACAGGGGCTG GTGACCTTCC AGGCGGATGC GGCAGCGACC
ATCTACGACA TCCACTGGAT CTACAAGATC CACATGTTCC TGGGCATGGT GATGTTCCTG
GTCTTCCCCT TCACCCGCTT GGTGCACATC TGGAGCGTGC CCTACGGCTA TATCTGGCGT
GCCTGGCAGA TCGTGCGGGT CCGCTCCGTC AACTGA
 
Protein sequence
MFATYLHDLA FAVFPYIAGT VFLIGSLLRF EKSQYTWKSN TTQLMSGGPR FRLGINLFHI 
GIIGLFLGHF FGLLTPQAIY SAVGLTAGAK QVLAIVAGGI FGIITLVGVA ILLHRRFTDP
RVRRTSYPMD SFILVLLAAQ LLTGLLTIPI SMGHLDGGTM LQIVAWAQGL VTFQADAAAT
IYDIHWIYKI HMFLGMVMFL VFPFTRLVHI WSVPYGYIWR AWQIVRVRSV N