| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0980 |
|---|
| Symbol | |
|---|
| ID | 4269331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1115431 |
|---|
| End bp | 1116213 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638125731 |
|---|
| Product | flagellar biosynthetic protein FliR |
|---|
| Protein accession | YP_741823 |
|---|
| Protein GI | 114320140 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.250656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0129952 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTCA CCATCGGCGA GATCACCGCC TGGGTCGGCA GCCTGATGTG GCCGCTGATG
CGCGTGGGGG CGATGGTGAT GGTGGCGCCG GTGTTCGGCA ACCAGTTGAT GCCGGTCCGG
GTCCGGGTCT TTTTCGGCCT CGCCCTGGCG GTGGCTGTGC TGCCGGCCGT GGGCGAGGTG
CCGCCGGTGG ATCCACTCTC CGCCGAGGGC CTGCTGATCA GTGTGCAGCA GGTGCTCATC
GGGCTGATCA TGGGCTTTAT GCTGCTGCTG GCGGTGAACG CGGTGGTGGT GGCCGGCGAG
AGCATGGCCC TGGCCATGGG GCTGGGCTTT GCCACCATGG TGGATCCCCA GACCGGTATG
TCGGTACCGG TGCTCTCGCA GGTGATGCTG GTGATCGTGA CCCTGGTCTT CCTGGGCATA
GGCGGGCATC TGATGCTCAT CGAGCTGACC GCCGCAAGCT TCTCCGCCCT GCCCATCGCC
GCCGAGGGGG TGGGCCGTGA GGCCTTCTTC GAGGTGGCGG CGTGGGCGTC ACAGATGTTC
GCCGGCGCGG TGCTCATCGC GCTGCCGGTG GTCACCGTGT TGCTGATCAT CAACCTGGCG
CTGGGGGTGA TGACCCGCGC CGCGCCCCAG ATGAACGTCT TCTCCGTGGG CCTGCCCATC
ACCATGCTGG TGGGCCCGGT GCTGGTGTTG GGCCTAGTGC TGCCGGTGTT GCCCACCCGC
ATGGCGATGA TCTGGTCCCA CGCCTTCGCG GTGGTGCGCG ACCTGCTCGC CATCACCGGC
TGA
|
|---|
| Protein sequence | MEFTIGEITA WVGSLMWPLM RVGAMVMVAP VFGNQLMPVR VRVFFGLALA VAVLPAVGEV
PPVDPLSAEG LLISVQQVLI GLIMGFMLLL AVNAVVVAGE SMALAMGLGF ATMVDPQTGM
SVPVLSQVML VIVTLVFLGI GGHLMLIELT AASFSALPIA AEGVGREAFF EVAAWASQMF
AGAVLIALPV VTVLLIINLA LGVMTRAAPQ MNVFSVGLPI TMLVGPVLVL GLVLPVLPTR
MAMIWSHAFA VVRDLLAITG
|
|---|
| |