| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0949 |
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| Symbol | |
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| ID | 4269683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1079918 |
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| End bp | 1080814 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638125701 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_741793 |
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| Protein GI | 114320110 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0628062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGG GAGGTTTCCT ACCAGGGCGC CTCGGCCTTT CCGGTGCCCG TATTCCTCAC
GTGGATCGTC ATGGCTTGCT GTGGCTGACA CGCGGACGGC TGTACGTAGA GGATGGCACG
CTGCATTTCA CGGCAGCAGA GTCCGAAGAC CTGGCCGCCG GTGATTATGC GATTCCGTAC
CAAGGCCTCT CAATGATTCT GCTCGGCCCT GGCAGTACGG TCACGCACGA TGTATTACGC
CTCCTTGCAC GCCACGGGAC GCTGTTGGCC GCTATTGGCG GGGGTGGCAC CAAATACTAC
ACGGCTCCGC CAATGGGCCA AGGCCGCTCA GATGTGGCCC GGCGCCACGC CACGCTTTGG
GCGAACAAAA CCCAACGGCT CGACGTCGCA CGACGCATGT ACGCCTTTCG CTTCGGGCGC
GTGCTTCCTC ATAAAGACAT CGCTGTACTG CGCGGCATTG AAGGCGGACG CATCAAGGAG
CTCTACCGGG TGGAAGCCAG CCGCTTCGGC ATTCCTTGGA AGGGGCGCCG TTACAATCGC
AACAACCCAT CTGCAGCGGA CGTCCCCAAC CAGGCCATCA ACCATGCGGC AACGTTCGTG
GAGGCCGCCG CAGACATTGC TGTGGCCGCC ACCGGCGCGC TGCCACCGCT CGGCTTTATC
CATGAGGAAT CGAGTAACGC TTTTACACTG GACATTGCCG ACCTCTACCG GGGCGAAATC
ACCGTCCCGT TGGCATTCCA GGCCGCCCGA AAGGTTCTTG ACGACCCGAC CCTCAGTATC
GAACGCACCT TGCGCCGAGA CGCGGCGAGC GCATTTCAAC GCCATAAAGT CATCCCGAAG
ATGATCGATC GAATAAAGGA CCTGATCAAT GCCGATGACA ATGGTCGTAA CACGTAA
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| Protein sequence | MSEGGFLPGR LGLSGARIPH VDRHGLLWLT RGRLYVEDGT LHFTAAESED LAAGDYAIPY
QGLSMILLGP GSTVTHDVLR LLARHGTLLA AIGGGGTKYY TAPPMGQGRS DVARRHATLW
ANKTQRLDVA RRMYAFRFGR VLPHKDIAVL RGIEGGRIKE LYRVEASRFG IPWKGRRYNR
NNPSAADVPN QAINHAATFV EAAADIAVAA TGALPPLGFI HEESSNAFTL DIADLYRGEI
TVPLAFQAAR KVLDDPTLSI ERTLRRDAAS AFQRHKVIPK MIDRIKDLIN ADDNGRNT
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