| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0931 |
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| Symbol | rpsA |
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| ID | 4268218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1056514 |
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| End bp | 1058199 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638125683 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_741775 |
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| Protein GI | 114320092 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA GCTTTGCAGA ACTGTTTGAG GAAAGCCTTG CCAACACCGA TATGCGCCCC
GGCGCAATCG TCATGGGCAA GGTGGTGGCC ATCGACGGTG ATCACGTGGT GGTCAACGCC
GGGTTGAAGT CCGAGGCGGT GATCCCTGCC TCCCAATTCT ACGACGAGGA GGGCAACCTC
GAAGTAGCGG AGGGGGACGA GGTCGAGGTC TCCCTGGACG CCGTCGAGGA CGGCTCCGGC
GAGACGCGTC TCTCCCGCGA GAAGGCCAAG CGGGCCTACG CCTGGCGGTT CCTCGAAGAC
GCCTACGAGA AGAGCGAGGC CGTCAAGGGC CAGATCAGCG GCAAGGTCAA GGGCGGTTTC
ACCGTCGACC TGGGCCATAT CCGCGCCTTC CTGCCCGGCT CCCTGGTGGA CATCCGGCCG
GTGCGCGACA CCACCTATCT GGAAGGGCGC GACCTGGAAT TCAAGGTCAT CAAGCTCGAT
CCGCGCCGTA ACAACGTCGT GGTCTCCCGC CGCGCCGTGG TGGAGGAGGA GTACTCCGCC
GAGCGCGAGC AGCTCCTCGA GAAGCTGCAG GAAGGTCAGG TGCTCAAAGG CATCGTCAAG
AACCTTACCG ACTACGGGGC CTTCGTGGAC CTGGGCGGCA TGGACGGCCT GCTGCACATC
ACCGACATGG CCTGGCGCCG GGTCAAGAAC CCCTCCGAGG TGGTCGAGGT CGGTCAGGAG
ATCGAGGTCA AGGTGCTCAA GTTCGACCGC GAGCGCAACC GTGTCTCCCT GGGCCTGAAG
CAGCTGGGTG CCGATCCGTG GGAGAACATC GGCGGCCGCT ACCCCGAGGG TGCGCGCGTG
CCGGGCCGTG TGACCAACAT CACCGAGTAC GGCGCGTTCG TCGAGATCGA AGAGGGCGTC
GAGGGCCTGG TCCACGTCTC CGAGATGGAC TGGACCAACA AGAACGTCAA CCCGGCGAAG
ATGGTCTCCA TCGGCGACGA GGTCGAGGTC ATGATCCTCG ACATCGACGA GGAGCGCCGC
CGTATCTCCC TGGGCATGAA GCAGTGCCTG CCCAACCCGT GGGACGAGTT CGCCGCCACC
CACCAGAAGG GCGACCGGGT CACCGGCCAG ATCAAGTCCA TCACCGACTT TGGCATCTTT
GTCGGGCTGG ATGGCGGTAT CGACGGCCTG GTGCACCTGT CCGACCTCTC CTGGGGCGAG
GCCGGCGAGG AGGCGGTGCG CAACTACCGC AAGGGTGAGG AAGTCGAGGC CGTGGTGCTG
TCGGTGGACC CCGAGCGCGA GCGCATCTCC CTGGGCATCA AGCAGCTCGA GCAGGACCCC
TTCGGTTCCT GGCTGGCGGA CCATCCCAAG GGCTCCCTGG TCAAGGGCAC CGTGAAGGAC
GTCGAGGCCA AGGGCGCCAC CGTGACGCTG GAAGGCGGCA TGGAGGGCTA CGTGCGCGCC
TCCGATATCT CCCGCGACCG GGTCGAGGAT GCCCGGACGG TCCTCAAGGA GGGCGAGGAG
ATCGAGGCCA AGTTTGTGGG CGTCGACCGC CGCAACCGCA TGGCCAACCT GTCCATCAAA
GCGAAGGACC AGGTGGAGGA GCAGCGGCTG GTGCAGGATC ACGCCCGGCC CACCGGCACT
GCCGGGACCA CTGCCCTCGG CGATCTGCTC AAGGAGCAGC TCGGCGAGCA GAACGACGAC
CGCTGA
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| Protein sequence | MTESFAELFE ESLANTDMRP GAIVMGKVVA IDGDHVVVNA GLKSEAVIPA SQFYDEEGNL
EVAEGDEVEV SLDAVEDGSG ETRLSREKAK RAYAWRFLED AYEKSEAVKG QISGKVKGGF
TVDLGHIRAF LPGSLVDIRP VRDTTYLEGR DLEFKVIKLD PRRNNVVVSR RAVVEEEYSA
EREQLLEKLQ EGQVLKGIVK NLTDYGAFVD LGGMDGLLHI TDMAWRRVKN PSEVVEVGQE
IEVKVLKFDR ERNRVSLGLK QLGADPWENI GGRYPEGARV PGRVTNITEY GAFVEIEEGV
EGLVHVSEMD WTNKNVNPAK MVSIGDEVEV MILDIDEERR RISLGMKQCL PNPWDEFAAT
HQKGDRVTGQ IKSITDFGIF VGLDGGIDGL VHLSDLSWGE AGEEAVRNYR KGEEVEAVVL
SVDPERERIS LGIKQLEQDP FGSWLADHPK GSLVKGTVKD VEAKGATVTL EGGMEGYVRA
SDISRDRVED ARTVLKEGEE IEAKFVGVDR RNRMANLSIK AKDQVEEQRL VQDHARPTGT
AGTTALGDLL KEQLGEQNDD R
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