| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0832 |
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| Symbol | |
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| ID | 4268257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 940438 |
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| End bp | 943509 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638125583 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_741676 |
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| Protein GI | 114319993 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGCC ATCGCGATAC CGATCACCCC CCCGCAGAGC TTGCCTATCC GGTGGTCCGC
CGCCGGGCTG TCGGCTGGTA CCTGGGCGCC GTTCTCACCC TGCTGCTGGT CGTGGTCTGG
CTGCTGCACG ATCAATACCA GCGCGATATC GCTCTGGCCG CGGACCGGAC CCAGGCGCGG
GTGGACATGG TGGCGGAGTG GGTCCGCAGC AGCCTACTGG TCAGCGAGCA CACCCTGGCG
GGCATCGCCC ACATCCTGGC CCCTGAGACG CCAGAGCGTA TGATCCCCTA TCACCTGGGC
GACGAAGCGC TGGACGGCTT CCTACGCCTG CGCCGGGACA GTCTGCCGAT CCTCAATGAG
CTGGCCATCC TCCGCCACGA CGGGACGGTG CTCAATAGCA CCCGGGAGGA CATGGCCCGG
GGCACAGACC TGGGCGACAC GGCCTTTCTC TCGGCGTTCC GCGCCGATCC CACCCTGCAC
GAGCTGATCA CCTCCCTCTA CCGATCACCC CTGGATGACC GGCACTATCT GATGCACCTC
CGGCGCATCT CCCGGGCACC GGACCCGACC GCCAACCTGG TGGCCATCCA ACTGGATCCG
GCCATCTTCT CGGAGGCCCT GCATCGCACC ACCCTCTCCC GAGGTGAGAG CATCACGGTG
CTGGACAGAG ACCTGCAGCT AGTCGCCCGT TACCCGGACC GTGACAGCGA CGGCGCCTCC
GTGCCGGTCA GCACGCCCGT CGAGACCCCG GAGCTAACAG CCTTCCTCGA GCAGGGGCAT
GCCACCGCCC GGATCCGCAT GCGCTCCCCG GTGGATGGGG TGGAACGCAT CTACACCGCC
CGACGGGTCA ATGCCCTCCC CTTCGTGGTC ATCTCCGGCG AGGCGATTGA CGTGGCCCTC
GGCGGTTGGC GTCAGCGGGC CTGGGCCATG GGCCTGGGGG TTGCCCTCGC CGCCCTGCTG
GGGACAGCAC TGCTGGCCCA TTACCTGCAC CGCCGGAGCC TGGAGCGCGC CCTGCGCCTC
GAGGTGCGCG GGCGGGAGGC GACGCAGGAG GCGCTCCAGT CCCGCGAGGC CCGTCTGCGG
GCCTTGGTCG ACGCCATGCC GGATCTGCTG TTCATGTTCG ACAGAGAGGG CCGGTTCATC
CACATTCATG CCGACGAGCC GGAAAAACTG CTGCTCCCCG CGGAACAGGC CCTTGGCAAG
CACTTTCGGA CGGTGTTACC GGAGCCGCTC AGCACCCCCC TGAAAGACGC CCTGGCGCGG
CTCGCCGCCG GTGAGGACCC GGTGCAGTAT GACTACACGC TGACGCTCGG CGGGACGGAA
CGGACCTTCA CCACTGTCGT GCGCCCGGTG CGCGGTGCCG ATAACCAGTA CCTTGGGGCG
CTGGCCCAGG TCCGCGACAT CACCGAAGCA CGGACCACGG AGGCGGAACT GCGGATCGCG
GCGGCCGCCT TCGAAACCCA TCTGGGCATG ATGATCACCG ATGCCGAAGG CCGCATCCAG
CGGGTGAACG ACACCTTTTG CCGGATCACC GGTTACCAAC AGGCCGAGGT ACTGGGCCAA
ACGCCCCGCC TGCTCAGCTC CGGGCGACAC GACGAGCGCT TCTACCAGCG GATGTGGGCA
CAGGTGCGGG AGCACGGGAG CTGGGAGGGG GAGATCTGGA ACCGCCGCAA GAACGGCGAG
ATATTCCCCG AGTGGCAGAC CATCACCGCC GTGCGGGACG ACAGCGGTGA GATCACCCAC
TACGTGGCGA CCCTGCACGA TATCAGCGAC CGCAAGGAGG CCGAGCGCCA GGTCCACCGG
CTGGCTTTTT ACGACACGCT CACCGGGCTG CCCAACCGAC GGCTGCTCTT GGAACGCCTG
GCACATTGCC TGCGCGGCAA TCACCGCAGC CGCCGCCAGG GCGCGCTGCT GTACCTGGAC
CTGGATCACT TCAAGGCGGT GAACGATGCC CATGGGCATG GCACGGGGGA CCGGCTGCTA
CAGGCCCTGA GTGGCCGCCT GTCCAACTCG ATCCGCGAGA GCGACACCCT CGCCCGGCTC
AACGCCGATG ACTTTCTGGT CCTGCTCACC GACCTGGCGG AGGAGACCCA GGCCGCCGCC
CGCGGCGCGG AGGCGGCGGC AGAGGCACTG ATTAAACAGC TTGAGGCGCC ACTGGTGATG
GATGGCGAAC CTATCCATTT GCACGCAAGC ATCGGGATCA CGCTCTTCCG CAACCACGAG
ACCAAACCGG AGGTGGCCGT TCAAGAGGCC GAACAGGCCA TGCACCAGGC AAAGCAAAGC
GGACGTAACG CCATCTGCTT CTTCGACCCG CTGATGCAGG CGGACATGCT GCGCCGGGTG
CACTTGGAGC GGGGCCTGCG GCGCGCGGTC CATGACGGCG GCCTGACCCT GCACTTCCAG
CCCCAGGTGG GGCCGGACGG TGACATCCTG GGGTACGAGG CGCTGCTGCG TTGGCCGCAC
CCGGAGCAGG GGCCCATCGG GCCGGGCGTT TTCATCCCCA TCGCCGAGCA AAGCCGGCTG
ATCATCCCCC TGGGCCGCTG GCTGCTGCAG GCCGCCGCCC GGCAATTGGC TGCCTGGGCC
CGGGACCCGG CCACCCGGGC GCTGACGCTG TCGGTCAACA TCAGCAGTGT GCAGTTCCGC
CACGACGACC TGGTGGCGGC CGTCCGCGAG GCCCTGGAAA CCACCGGCGC GCCGGCGGAG
CGGCTGAAGC TGGAGGTCAC TGAGAGCCTG CTGATGGAGG AGCCGGATCA GGTCTGCGCG
ACCATGGAGC GGCTGCGCGC CCTGGGCGTG CACTTCTCGC TGGACGACTT CGGCACCGGG
TTTTCCTCCC TGGCCTATCT CCAACGGCTG CCTCTGGATG AGCTGAAGAT CGACCAGTCC
TTCGTCCAGT CCCTGGAGCA GGCACCGGCG GCGGACGCCA TTGTCGGCTC CATCATCGGG
CTGGCCCGGA GCCTGTCCCT GCACGTCATC GCCGAAGGGG TGGAGACCGA GACCCAGCGT
ACCCGGCTCG CCGCCCACGG CTGCCACCGC TACCAGGGCT ACCTGTTCGG CGCCCCGGCC
CCGCTGGCAT AA
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| Protein sequence | MSGHRDTDHP PAELAYPVVR RRAVGWYLGA VLTLLLVVVW LLHDQYQRDI ALAADRTQAR
VDMVAEWVRS SLLVSEHTLA GIAHILAPET PERMIPYHLG DEALDGFLRL RRDSLPILNE
LAILRHDGTV LNSTREDMAR GTDLGDTAFL SAFRADPTLH ELITSLYRSP LDDRHYLMHL
RRISRAPDPT ANLVAIQLDP AIFSEALHRT TLSRGESITV LDRDLQLVAR YPDRDSDGAS
VPVSTPVETP ELTAFLEQGH ATARIRMRSP VDGVERIYTA RRVNALPFVV ISGEAIDVAL
GGWRQRAWAM GLGVALAALL GTALLAHYLH RRSLERALRL EVRGREATQE ALQSREARLR
ALVDAMPDLL FMFDREGRFI HIHADEPEKL LLPAEQALGK HFRTVLPEPL STPLKDALAR
LAAGEDPVQY DYTLTLGGTE RTFTTVVRPV RGADNQYLGA LAQVRDITEA RTTEAELRIA
AAAFETHLGM MITDAEGRIQ RVNDTFCRIT GYQQAEVLGQ TPRLLSSGRH DERFYQRMWA
QVREHGSWEG EIWNRRKNGE IFPEWQTITA VRDDSGEITH YVATLHDISD RKEAERQVHR
LAFYDTLTGL PNRRLLLERL AHCLRGNHRS RRQGALLYLD LDHFKAVNDA HGHGTGDRLL
QALSGRLSNS IRESDTLARL NADDFLVLLT DLAEETQAAA RGAEAAAEAL IKQLEAPLVM
DGEPIHLHAS IGITLFRNHE TKPEVAVQEA EQAMHQAKQS GRNAICFFDP LMQADMLRRV
HLERGLRRAV HDGGLTLHFQ PQVGPDGDIL GYEALLRWPH PEQGPIGPGV FIPIAEQSRL
IIPLGRWLLQ AAARQLAAWA RDPATRALTL SVNISSVQFR HDDLVAAVRE ALETTGAPAE
RLKLEVTESL LMEEPDQVCA TMERLRALGV HFSLDDFGTG FSSLAYLQRL PLDELKIDQS
FVQSLEQAPA ADAIVGSIIG LARSLSLHVI AEGVETETQR TRLAAHGCHR YQGYLFGAPA
PLA
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