Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0822 |
Symbol | |
ID | 4268247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 928093 |
End bp | 929172 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638125573 |
Product | porin |
Protein accession | YP_741666 |
Protein GI | 114319983 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTTTC GCAATTTTTC CATTGCAGTG GCGGCCGGTG CGTTGGCGCT GCCCCTGGTG GCCCAGGCGG ATGGGTTGAC CCTCTACGGG GAAGTCCACC TCTCTGCCGA CATTGCCCAT GATGGCGACC GTCGCAGCGA ATTCCTGGCC AGTCGCGGGT CCCTGCTGGG CATAACGGGC TCAGAATACT TGGGCGCGGG CCTTACCGGC CTTTTCCAGT ACGAGACCGA GGTCCACCTG ACCGCCGGCG GAGACGGCCT GTTCGGGGCC GGCGAGAACG CATTTGTTGG GCTGGACGGT GCGTTCGGTA CCGTTCTGGC CGGGCACATG GAGGATCCGC TGTTCGTCGC GATCGACGAC CTGCAGATGT TCGTCGACCG CGTGGGCGAT GCCCACCTGT TTGGGGCCAC GCCGGGCAAC AACGAGTTTC AGGAGAACGT CCTGGTCTAC CTGAGCCCCG AGCTCAACGG CTTTTCGCTG ACCGCAATGT ACGGGCCGCG CCAGGGCACT GCCCGTGGCG ATCTGTGGGT CGCCCATGGC CAGTTCGACG GGGAGCTTGG CGATGGCAAC CTCTATGCCG GCCTGTCTTA TCTGCAGGCC AATCAGGGGC GCGTGGATGA GCTCTTTGAC CTAAGCCCGG GCGATGAGGG GTTCGGCGAA TGGAAGCACA AGCTCTACCA GCTGGCCTTG GGTTATGAAC GGCCGGACGT CTGGCGCGGC TTCGCCTTCT ATCAGTGTTA CCAAAGCACC GATGTCGCCC CGTTGGAGGA CGACCGCGTG TTCGGAGTCG GCGTGGGGGT GCTGGCCCGT CCCGATGTGG AGCTCCTGGC CCAGGTGACC CGCTACGACG CCGATGCGTC CCGCAGCGAC AGCACGCTCT ATGCCGTGGG GGCCGATTAC TTCATCACCG ATCGCACCAC GCTTTACGCG GCTTACGCCA TGAGCCGTAA CCAGCGTAAT GCCGACAGGC TGCCCACCGA GCCCGATTAC TACGGCGCAG ATGACGAGAG TCGGGGCGTG AACGTGGCCC AGGGCGATAA TGCCTGGGCG GTGTCCCTCG GCGTTAAGCA TGCCTTTTGA
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Protein sequence | MHFRNFSIAV AAGALALPLV AQADGLTLYG EVHLSADIAH DGDRRSEFLA SRGSLLGITG SEYLGAGLTG LFQYETEVHL TAGGDGLFGA GENAFVGLDG AFGTVLAGHM EDPLFVAIDD LQMFVDRVGD AHLFGATPGN NEFQENVLVY LSPELNGFSL TAMYGPRQGT ARGDLWVAHG QFDGELGDGN LYAGLSYLQA NQGRVDELFD LSPGDEGFGE WKHKLYQLAL GYERPDVWRG FAFYQCYQST DVAPLEDDRV FGVGVGVLAR PDVELLAQVT RYDADASRSD STLYAVGADY FITDRTTLYA AYAMSRNQRN ADRLPTEPDY YGADDESRGV NVAQGDNAWA VSLGVKHAF
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