| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0802 |
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| Symbol | |
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| ID | 4270566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 897885 |
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| End bp | 899915 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638125553 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_741646 |
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| Protein GI | 114319963 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAG CGTTCCTCAT CGATCTGCCA CGCCCGGTGA AGCGGTTCGT CATGATCATG
GCGGACACGC TCATGCTGCC CGTGGCCCTG TGGGCGGCCT TCAGCCTGCG CCTGGGGACC
CCCGTCCCCG GTGTGCTGCT GGACTACGGG TGGCTGCTGC TGCTCGTGCC GGCGGTCAGC
CTGCCGGTTT TCGCCCTGTT CGGCCTTTAC CGCGCGGTGG TCCGTTACAT GGGGCTGCAG
GCGATCATTG CGGTGGTGCA GGGGGTGACC CTGTCCGCAC TGGTCTTCGG CGCCCTGGTT
ATGCTGGGCC GGCTGGAGGG TATTCCCCGC TCCGCTCTGC TGATCTACTG GCTGCTGGCG
CTGTTCATGG TGGGCGGGTC GCGCCTGGTG GTGCGCGCTT GGTTCCAGGC GGCGATCAAA
CGCCGGGGGA CCGAGAAGCC GGTGGTCATC TACGGCGCGG GGACCGGGGG GATTGGCCTG
GCCACCAGCC TGTTCAATGG CCGGCAGTAC CGCCCGGTGG CCTTCGTGGA TGACAACCCG
GCAAAACAGG GCACGGTGAT CGCCGGGCTG CCCGTGCGCA AACCGGCCGA GCTGGCAGAA
CTGATCGACC GCAACCGGCT GGAGTATATC CTGCTGGCCA TGCCGCGGCT GTCGCGGACC
CGCCGCCGGG AGATCGTCGC CCAGTTGGAG CCGCTGCCCG CCCACATCCT CACCATCCCC
AGCCTGGCGG ACATCGTGGC CAACCGGGCC AGTCCCGACG AGGTGCGGGA GGTGGAGGTG
GAGGACCTGC TCGGGCGTGA TGCCGTGGGC CCGCGGCGGG AGCTGCTCGC CCGCTGCATC
CGCGGTAAGA CGGTCATGGT CACCGGCGCC GGGGGCTCCA TCGGCTCCGA GCTTTGCCGG
CAGATCCTGC GCGAGCAGCC CACTCAGCTG GTGTTGGTCG AGCGCTCCGA GTTCGCCCTC
TACGCCATCG AGCGCGAGCT CCAGGCTCAG TTGCAGGGGG AGGCCCGGCG CCCCGCCGTC
CAGGCCGTCC TGGCCAATGT CACCGACCTG GCGCGCATGG AAATGCTGAT GCACGCCTTC
CGCGTCGACA CGGTCTATCA CGCCGCTGCC TACAAGCACG TCCCGCTGGT GGAGACCAAC
GTGCTGGAGG GCATCGATAA CAACGTCTTC GGCACCCTGC ACACGGCCCT GGCGGCGGTG
GAGGCCGGGG TCCGGTACTT CGTGCTAGTG AGCACCGACA AGGCCGTCCG CCCCACCAAT
GTCATGGGGG CGAGCAAGCG CCTGGCCGAA CTGGTGCTGC AGGGGTTGGC CCGTCAGCCC
GATATCCGCA CCCGCTTCTC CATGGTCCGC TTCGGTAATG TGCTCGGCTC CTCCGGCTCG
GTGGTGCCGC TGTTCCGCGA GCAGATCCGC AACGGCGGCC CGATCACGGT CACCCACCCC
GAGGTCACCC GCTATTTCAT GACCATCCCC GAGGCCGCCT CGCTGGTCCT GCAGGCGGGA
TCCATGGCCC ACGGCGGCGA GGTCTTCGTG CTGGACATGG GCGAGCCGGT GCGCATCGTC
GACCTGGCCC GGCGCATGAT CCGTCTGTCC GGTCTCGAGG AGCGAAACGC GGAACACCCC
GATGGCGACA TCGAGATCCA TTTCACCGGC CTGCGCCCCG GCGAGAAGTT GTATGAGGAG
CTGCTGCTGG GTGAGGCGGT CACCGAGACC AGCCACCCCA TGATCATGCG CGCCCGCGAG
GGGCACTTGC CCACCGATAC CCTGCAAAGC CTGCTAAGCG AGCTGCGCGC GGCCTGCCGG
CGCTACAACA CCCAGGACGC CCGCAAGCTG ATGGCCCAGG TGGTGGAGGG TTACGAGGCC
GCCGGACCCA ACTGCGACGT GCTCGGGCGG CAGCTGAACG AGTCGGCCGA CGCCGTCGCC
CGAGGCCTGT TCAGGGACGG CGAAGGCCCC TGCCCCATCC GCCGGGCCTA CCAGCGTGGC
ACCACGCCAA TAAGCGCCCC CCAATCAGAA GCCCCATTGG CTAAACGCTG A
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| Protein sequence | MNKAFLIDLP RPVKRFVMIM ADTLMLPVAL WAAFSLRLGT PVPGVLLDYG WLLLLVPAVS
LPVFALFGLY RAVVRYMGLQ AIIAVVQGVT LSALVFGALV MLGRLEGIPR SALLIYWLLA
LFMVGGSRLV VRAWFQAAIK RRGTEKPVVI YGAGTGGIGL ATSLFNGRQY RPVAFVDDNP
AKQGTVIAGL PVRKPAELAE LIDRNRLEYI LLAMPRLSRT RRREIVAQLE PLPAHILTIP
SLADIVANRA SPDEVREVEV EDLLGRDAVG PRRELLARCI RGKTVMVTGA GGSIGSELCR
QILREQPTQL VLVERSEFAL YAIERELQAQ LQGEARRPAV QAVLANVTDL ARMEMLMHAF
RVDTVYHAAA YKHVPLVETN VLEGIDNNVF GTLHTALAAV EAGVRYFVLV STDKAVRPTN
VMGASKRLAE LVLQGLARQP DIRTRFSMVR FGNVLGSSGS VVPLFREQIR NGGPITVTHP
EVTRYFMTIP EAASLVLQAG SMAHGGEVFV LDMGEPVRIV DLARRMIRLS GLEERNAEHP
DGDIEIHFTG LRPGEKLYEE LLLGEAVTET SHPMIMRARE GHLPTDTLQS LLSELRAACR
RYNTQDARKL MAQVVEGYEA AGPNCDVLGR QLNESADAVA RGLFRDGEGP CPIRRAYQRG
TTPISAPQSE APLAKR
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