Gene Mlg_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0560 
Symbol 
ID4270315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp608424 
End bp609506 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content68% 
IMG OID638125301 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_741404 
Protein GI114319721 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0147721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00000329056 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCGGT TGCTGGACCG TTATCTGATC ATCACCGTGG TGGCGAGCGC CCTGGTGGCG 
CTGGTGGTCA TCATGTCGCT GGACCTGGTG TTCAGCTTCG TGGACGAGGG CGGGGATATC
GGCACCGCCG ATTACGGGCC GTTATCGGCC CTCGCCTATG TGCTGCTCAG TAGCCCGTCC
CGGGCCTATG AGGCCTTTCC CTTCGCGACC CTTATCGGTG CGCTGATGGG GTTGGGTGCG
TTGGCGGCGC GCAATGAGCT GACGGTGATG CGTGCGGCCG GTGTCTCGGT ATTGCAGATC
GCCCGGGCGG TGGCGGCTGG CGGCCTGGTG CTGGCGCTGA TCGCCATGGC CATGGGCGAG
TGGGTGGTGC CGCCGGCCGA GCGGGCGGCC ACCGAGCTGC GCGCCAGCGC CATGGCCCGC
GACGTCGGTA TCAGCGGGGC CGGTGGCTTG TGGGCGCGGG ACGGCGGCCA GTTCATCGAG
GTGCGGCGGG CCCGCAGCCC GGCCCACCTG GAGGGGCTGA CCATCTATCA CTTCGAGGAG
CGCGATGGCG AGCCGATGAC CCTGCGTCGG GTCCTCTCCG GCAGCGAGGC GTTGTTTCGG
GACGGCCGGT GGATCCTGCG CGAGCCGGGC GAGGTGCATC TGCACGCCGA TGGCATCAGT
GTCGCCGATC TGGGTGACGA GAAGGTGTGG GAGAGCGCCC TGTCACCGGC GGTGCTGGAT
GTGGTGGTGG TGGATCCGGA AAGCCTGTCC ATGGCCGATT TGCGCACCTA CATCGGCTAT
CTGGAGGCCA ACGAGTTGGA CAGCGGCGAA TGGCGGCTGG CCTTCTGGGT CAAGGTGGCC
ACCCCCATCT CCACCCTGGC CATGCTGCTG CTGACCATCC CGCTGGTGTT CGGGGCGGTG
CGCTCCACCG GGGCCGGGCA GCGCATCTTT ATCGGGGTGC TGATCGGGGT GGCGTTCTTC
CTGGTCAACC GCATGCTCAA CCACGCCGGG GTGGTCTTCG GGCTGCCGCC CTCGGCCAGC
GCCCTGCTGC CGGCATTCGC CTTCCTGGCC GCCGGTATCC TGGGGATTCT CAAGGTGCGC
TGA
 
Protein sequence
MIRLLDRYLI ITVVASALVA LVVIMSLDLV FSFVDEGGDI GTADYGPLSA LAYVLLSSPS 
RAYEAFPFAT LIGALMGLGA LAARNELTVM RAAGVSVLQI ARAVAAGGLV LALIAMAMGE
WVVPPAERAA TELRASAMAR DVGISGAGGL WARDGGQFIE VRRARSPAHL EGLTIYHFEE
RDGEPMTLRR VLSGSEALFR DGRWILREPG EVHLHADGIS VADLGDEKVW ESALSPAVLD
VVVVDPESLS MADLRTYIGY LEANELDSGE WRLAFWVKVA TPISTLAMLL LTIPLVFGAV
RSTGAGQRIF IGVLIGVAFF LVNRMLNHAG VVFGLPPSAS ALLPAFAFLA AGILGILKVR