| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0559 |
|---|
| Symbol | |
|---|
| ID | 4270314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 607309 |
|---|
| End bp | 608427 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638125300 |
|---|
| Product | permease YjgP/YjgQ family protein |
|---|
| Protein accession | YP_741403 |
|---|
| Protein GI | 114319720 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.298895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.00000418027 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGTCGCCCA TCCGCATTCC CGTCGTCGAT CGCTACCTGG TGCGCGAGGT GTTGTTCGCC
TGGCTGGCGG TGCTGTTGGT GCTGTTCGCG GTGCTGGCGA CCAACCGGCT GATCGGCTAT
CTGGGCGATG CCGCCGGTGG CGAACTGCCC GGTGGGGTCA TCCTCACCCT GCTGGGCCTG
CAGACGGTTC GCTATCTGGG CATGATTCTG CCCGCCAGCT TCTTTCTGGG CATCGTCCTC
GCCTTTGGCC GGCTCTACCG GGACAGCGAG ATGGCGGTGA TGTCCGCCTG CGGGATCGGG
CCCTGGCGGC AGTTTCGCGC GCTGCTCTGG TTGGCCCTGC CGCTGGCAGG GCTGGTGGGG
CTGCTGTCGC TGTACTGGGG GCCGGCGGCG ACCCAGAAGG CGGAGCAGGT GCAGGCCGAG
GCGGAGGCCC AGGTGGAGTT CGCCGCCCTG CAGGCCGGCC GTTTCCTGCA GGCGCGCGGG
GCCACCGAAG GAACGCTCTA CCTGGAACGG CTCAGCGAAG ACCAGCGCGA GATGGAGGAC
GTCTTCATCC GCGCCGGTGG CACCGCGGAC CGGGTGGTCC TGGCGGCCCG GCGCGGGGTA
CAGGAGAAGG ACCCGGAGAC CGGTGACCGC TACCTGGTGC TGCTGGATGG CTGGCGTTAC
GACGGCCGAC CGGGCGCTGC GGACTGGCGG GTGACCCGCT TCGAGCGCCA CGGGGTCCTG
GTGGCGGAGG GTTCGGAGGA GGTGGCCGTG CGCCTGCGCC GCAATGCTCA GCCCACCGCC
GAGCTGTGGG GTTCCGACCA TCCGGCCGAC CGGGCCGAGG TGCAATGGCG GCTGGCGATG
CCGGCCATGA CCCTCCTGCT GGCGCTGCTG GCGGTGCCGC TCAGCAAGAG CGCGCCGCGG
GACGGGCGTT ACGGGCGCCT GCTCTCTGCC GTGTTGGTCT ATGTGGGCTA TTTCCAGTTT
CTGACCGTGG GCCAGGATTG GCTGGAGACG GGCCAGGTCC CGGCTGCCCT TGGGCTCTGG
TGGTTGCATG GGGCGGTGCT GGCCGTGGGC GTGCTGGGCC TGCTCTGGCG CTTCGACCTG
CTGCCCGCGC GTGGCGGGCA CAAGGGGCGG GCACCATGA
|
|---|
| Protein sequence | MSPIRIPVVD RYLVREVLFA WLAVLLVLFA VLATNRLIGY LGDAAGGELP GGVILTLLGL
QTVRYLGMIL PASFFLGIVL AFGRLYRDSE MAVMSACGIG PWRQFRALLW LALPLAGLVG
LLSLYWGPAA TQKAEQVQAE AEAQVEFAAL QAGRFLQARG ATEGTLYLER LSEDQREMED
VFIRAGGTAD RVVLAARRGV QEKDPETGDR YLVLLDGWRY DGRPGAADWR VTRFERHGVL
VAEGSEEVAV RLRRNAQPTA ELWGSDHPAD RAEVQWRLAM PAMTLLLALL AVPLSKSAPR
DGRYGRLLSA VLVYVGYFQF LTVGQDWLET GQVPAALGLW WLHGAVLAVG VLGLLWRFDL
LPARGGHKGR AP
|
|---|
| |