Gene Mlg_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0536 
Symbol 
ID4268065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp583214 
End bp583876 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content70% 
IMG OID638125277 
ProducttRNA guanosine-2'-O-methyltransferase 
Protein accessionYP_741380 
Protein GI114319697 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.528971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0365793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC GACGCCTGCA CCGTATGCGC CAGACCCTGG AGCGCCGCCA GCCCGACCTG 
CAGGTCCTGC TGGACCAGGT CCACAAGCCG CACAATCTCT CCGCCATCCT GCGTACCTGC
GATGCGGTGG GCGTGCCCCG GGCACATGCG GTCTCCCGGC ACCAGGACTT CACGGTGCAC
CGCGCCGCCT CGTCGGGCAC CGGCCAGTGG GTGGCGGTGG AGACCCACGC CGATTTGCCC
GCCGCCGTCC GTGCCGTGCA GGGACAGGGC ATGAAGGTTT ACGCCGCCCA CCTGTCAGAG
CAGGCGGTGG ACTACCGCCA GGTGGATTAC ACCAAACCGT GCTGCCTGCT GCTGGGGGCG
GAGAAGGAGG GCGTCAGCGA GGAGGGTGCC GCGCTGGCCG ACGGGCATGT GATCATCCCC
ATGTTCGGGC TGGGGGCGTC ACTGAACGTC TCGGTGGCGG CGGCCGTGAT CCTGTTCGAG
GCCCAGCGCC AGCGCCTGGC GGCCGGGCAA TACGAGACCC CACGGATGGC GGAGGCGGAG
ATCACCCGCA CCCTGGTGGA GTGGCTGCAC CCGAGGATCG CCGAACGCTG CCGCAAAGAG
GGCCGGCCCT ACCCCGCGCT GGACGAGGAC GGCGGCGTGA TCTGGACACA CGCCCCGTCC
TAA
 
Protein sequence
MTARRLHRMR QTLERRQPDL QVLLDQVHKP HNLSAILRTC DAVGVPRAHA VSRHQDFTVH 
RAASSGTGQW VAVETHADLP AAVRAVQGQG MKVYAAHLSE QAVDYRQVDY TKPCCLLLGA
EKEGVSEEGA ALADGHVIIP MFGLGASLNV SVAAAVILFE AQRQRLAAGQ YETPRMAEAE
ITRTLVEWLH PRIAERCRKE GRPYPALDED GGVIWTHAPS