| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0530 |
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| Symbol | |
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| ID | 4268059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 573520 |
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| End bp | 574464 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638125271 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_741374 |
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| Protein GI | 114319691 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.491525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.49371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTGGC GTGCCGCGGG ACTGGTGATC TGCCTGCTGG TGCTGGCCGG GTGTGCCAGC
ACCAGCACCC TGCGCGAGGG GCTGCCGGAG CCGCCACCGG CGGTGGAGAT AGCGGACGTG
CCCTTCCACC CCGATGAGAC GCTCTACTGC GGCCCGGCCT CGCTGGCCAC GGTGCTGGAG
TGGAGCGGGG TGGAGACCAC CCCAGAGGCC CTGATCCCGG CACTGCACGT ACCGGAGCGG
GGGGGCACCC TGCAAAGCGA ACTGGTGGCG CAGGCGCGGC ATCAGGGGCG GCTGGCCTAC
GTGCTGCGCC CCCGCACCGA GGCCCTGATC ACGGAACTGG AGGCCGGCCA TCCGGTGGTC
GTCCTGCAGA ACCTAGGCCT GGGCATCGCC CCGCGCTGGC ACTACGCGGT GCTGGTGGGT
CTGGACCCGG CAGCGGACGA GTTCATCCTG CGCTCCGGTC CCCACGAGCG CCACCGCACG
CCTGTGAACA CCTTCCTGCG GACCTGGGCA CGCGGCGAGA GCTGGGCGCT GGTGGTGCTC
GAGCCGGGCC AGGTCCCGGC CAGTGCCGAC CCCGGACGCT ACATGGAGGC CGCCCACGCC
CTGGAGGCCA CCGGTCAGCA GGCCGCCGCC AAACGCGCCT GGCAGGCCGG TATCAGCCGC
TGGCCGCAGA GCCCCCACAT GGCGGTGGCG CTGGCCAATC TGCATTTCGC CCAGGGCGAC
CTGGAGCAAG CGGAGCGCCT GCTGCGCCAG GCCCTGGAGC GCAATGCGGG ATCGGGCGCC
GTGTACAACA ACCTGGCCTG GATCCTGGCC GAGCAGGGCC AGTGGTCCAG CGCCCTGCAG
ATGGCCGAGC AGGCCGTCGC CGAAGGCGGG CCACACCGCA ACCAGTTCCG CCAGACACTG
GAAACCTTGC GCGAGCAGGC CGGAGACCGG GCCGCCAACG ACTGA
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| Protein sequence | MAWRAAGLVI CLLVLAGCAS TSTLREGLPE PPPAVEIADV PFHPDETLYC GPASLATVLE
WSGVETTPEA LIPALHVPER GGTLQSELVA QARHQGRLAY VLRPRTEALI TELEAGHPVV
VLQNLGLGIA PRWHYAVLVG LDPAADEFIL RSGPHERHRT PVNTFLRTWA RGESWALVVL
EPGQVPASAD PGRYMEAAHA LEATGQQAAA KRAWQAGISR WPQSPHMAVA LANLHFAQGD
LEQAERLLRQ ALERNAGSGA VYNNLAWILA EQGQWSSALQ MAEQAVAEGG PHRNQFRQTL
ETLREQAGDR AAND
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