| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0438 |
|---|
| Symbol | |
|---|
| ID | 4268291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 486713 |
|---|
| End bp | 487912 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638125168 |
|---|
| Product | tyrosyl-tRNA synthetase |
|---|
| Protein accession | YP_741282 |
|---|
| Protein GI | 114319599 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000725763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0537593 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGG CAAATGATGC CATGGCACTG TTGCGCCGCG GTGCCGAGGA GATCCTGCTG
GAGAACGAGC TGCGGGACAA GCTCCAGTAT GATCGTCCGC TGCGCGTCAA GGCCGGCTTC
GATCCCACCG CGCCGGACCT TCACCTGGGC CATACGGTGC TGATCAATAA GCTGCGTCAG
TTCCAGGATC TGGGGCATGA GGTCTACTTC CTGATCGGTG ATTTCACCGG GATGATTGGG
GACCCCAGCG GCAAAAGCGC CACCCGCCCC CCACTTACTC GCGAGGAGGT GCGCGACAAC
GCCCGCACCT ACGAGGAACA AATCTTCCAG GTGCTGGATC CGGAGCGCAC CCAGGTGGTG
TTTAACTCCG ACTGGATGAA CGATTTCTCC GCTGCGGACA TGATCCGGCT GGCCTCCCAC
CATACCGTCG CGCGCATGCT GGAGCGCGAC GACTTTCATA AGCGTTATGC CGCCCGCCAG
CCCATCGCCA TCCACGAGTT CCTCTACCCG CTGGTCCAGG GGTACGACTC GGTCGCCCTG
AAGGCGGACG TCGAGCTGGG CGGCACCGAT CAGAAGTTCA ACCTGCTGGT GGGGCGGGAG
CTACAGAAGG CCTACGGCCA GTCTCCGCAG ACGGTGCTGA CCATGCCCTT GCTGGAGGGG
CTGGACGGCG TGCAGAAGAT GTCCAAGTCG CTGGGCAACT ACGTGGGGAT CAAAGAACCG
GCTGAGGAGA TGTTCGGAAA GCTGATGTCC ATCTCCGATG ACCTCATGTG GCGCTACTTC
CTGTTGCTCA GCTTCCGACC GGAGAGCGAG ATCGAGCGGC TCCGCCGTGA CGTCGCCGAA
GGGCGCAATC CCCGGGACGT CAAGTTTGAA CTGGCCGAGG AGATCGTCAC CCGATTTCAC
GACGCGCGCG CGGCGGCGCG CGCGAGAGAG GTGTTCATCG CCCGGTTCCG GAAAGGCGCC
ATGCCGGAGG AGATGCCGGA ACACACCCTG CCCGCCGACG ATGGCGGCCT GGCCCTCGAT
CGGTTGCTCA AGGGGGCCGG CCTGGTGGCC AGCACCTCGG ACGCCCGGCG CATGCTCAAG
CAGGGCGCGG TGCGCATCGA TGGCGAGCGT GTGGAGGATC AACGACTTGT GGTGCCCGCC
GGCGAGACCC ATGTCTATCA GGTGGGCAAG CGCCGTTTCG CCCGTGTGAC CGTGGCGTGA
|
|---|
| Protein sequence | MTEANDAMAL LRRGAEEILL ENELRDKLQY DRPLRVKAGF DPTAPDLHLG HTVLINKLRQ
FQDLGHEVYF LIGDFTGMIG DPSGKSATRP PLTREEVRDN ARTYEEQIFQ VLDPERTQVV
FNSDWMNDFS AADMIRLASH HTVARMLERD DFHKRYAARQ PIAIHEFLYP LVQGYDSVAL
KADVELGGTD QKFNLLVGRE LQKAYGQSPQ TVLTMPLLEG LDGVQKMSKS LGNYVGIKEP
AEEMFGKLMS ISDDLMWRYF LLLSFRPESE IERLRRDVAE GRNPRDVKFE LAEEIVTRFH
DARAAARARE VFIARFRKGA MPEEMPEHTL PADDGGLALD RLLKGAGLVA STSDARRMLK
QGAVRIDGER VEDQRLVVPA GETHVYQVGK RRFARVTVA
|
|---|
| |