Gene Mlg_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0406 
Symbol 
ID4269984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp452676 
End bp453143 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content75% 
IMG OID638125136 
Producthypothetical protein 
Protein accessionYP_741250 
Protein GI114319567 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.57756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.24642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTATCC GCTTGATCAG CGTCGGCGGG CGCATGCCCG GCTGGGCCGC CGAGGGCTAC 
CGGGAATACG CCCAGCGGTT GGGCGGCGGG ATCAGCCTGG AGCTGGTGGA GATCCCCCTG
GGGCGGCGGG GCAAGGGGGC CGACCCCCGC CGGGCCCTGG ACGAGGAGGG GCGGCGGATG
CTCAAGGCCC TGGGTGACGA ACAGGTGGTG GCCCTGGACG TCCGCGGCAA GGCCTGGGAC
ACCCCGGCGC TGGCCCGTGA ACTGGACGGC TGGCTGCACG ACGGCCGCGA CCTGGCCCTG
CTGGTGGGCG GGCCCGACGG CCTGCACCCG GACTGCCTGG CCCGCGCCGA GCGCCGCTGG
TCGCTCTCGC CGCTGACCTT CCCCCACATG CTGGTCCGGG TGCTGCTGGC CGAGCAGCTC
TACCGGGCCT GGAGCCTGCT CCAGGGGCAT CCCTACCACC GGGCCTGA
 
Protein sequence
MRIRLISVGG RMPGWAAEGY REYAQRLGGG ISLELVEIPL GRRGKGADPR RALDEEGRRM 
LKALGDEQVV ALDVRGKAWD TPALARELDG WLHDGRDLAL LVGGPDGLHP DCLARAERRW
SLSPLTFPHM LVRVLLAEQL YRAWSLLQGH PYHRA