| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0373 |
|---|
| Symbol | glyA |
|---|
| ID | 4268998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 418391 |
|---|
| End bp | 419650 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638125104 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_741218 |
|---|
| Protein GI | 114319535 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.238829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.155765 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTCCC GTGATATGAC CATCGCCAGC TTTGACCCGG AACTCTCCGA GGCCATGGAG
GCCGAGCGCC GTCGGCAGGA GGATCACATC GAGCTGATCG CCTCCGAGAA CTACGCCAGC
CCCCGGGTGC TCGAGGCCCA GGGCAGCGTA CTCACCAACA AGTATGCCGA GGGCTACCCG
GGCAAGCGCT ATTACGGGGG CTGCGAGCAT GTGGACGAGG CCGAGCGCCT GGCCATCGAG
CGGGCCAAGC AGCTCTTTGG CGCCGACTAC GCCAATGTGC AGCCGCACTC CGGCTCCCAG
GCCAACGCGG CCGTCTATCT GGCGCTGCTC CAGCCCGGCG ACACCATCCT GGGCATGAGC
CTGGACCACG GCGGGCACCT GACCCACGGC GCCAAGGTGA ACTTCTCCGG GCGGCTGTTC
AACGCCGTGC AGTACGGCGT CTGCCCCGAC ACCGGCGAGC TGGACTACGC CCAGCTCGAG
CGCCTGGCCA AGGAGCACCA GCCGAAGATG ATTATCGGCG GCTTCTCCGC CTACTCCCGG
GTGGTGGACT GGCAGCGCCT GCGCGACATC GCCGATTCGG TGGGCGCCTA CCTGCTGGTG
GATATGGCCC ACGTGGCGGG CCTGGTCGCC GCCGGTGTCT ACCCGAGCCC GGTGCAGATC
GCCGATGTCA CCACCACCAC CACCCACAAG ACCCTGCGCG GCCCGCGCGG TGGCCTGATC
CTGGCCCGGG CCAACGCCGA GGTGGAGAAA AAGCTCAACT CGCTGGTCTT CCCCGGCACC
CAGGGCGGGC CGCTGATGCA CGCCATCGCC GGCAAGGCCG TGGCCTTCAA AGAGGCCCTG
GAGCCGGAGT TCAAGGCCTA TCAGCAGCAG GTGGTCGCAA ACGCCCGGGC GATGGCCCAG
GGGCTGATCG AGCGCGGCTA CAAGGTGGTC TCGGGCGGCA CCGACAATCA CCTGTTCCTG
ATCGACCTGG TGGACAAGGG GCTGACCGGC AAGGCCGCCG ACGCCGCCCT GGGCAAGGCG
CACATCACGG TCAACAAGAA CACCGTGCCC AACGATCCGC AGTCGCCCTT TGTCACCTCC
GGCCTGCGCA TTGGCACCCC GGCGATCACC ACCCGCGGCT TCAAGGAAGA GGAGTGCCGC
GAGCTGGCTG GTTGGATGGC CGACGTGCTG GATGACATCG AGAACGAGGA CGTGATTGCG
CGGGTGCGCG AGCAGGTCAC CCAGGTCTGC CGCCGCCTGC CGGTCTACCA ACAGGGCTGA
|
|---|
| Protein sequence | MFSRDMTIAS FDPELSEAME AERRRQEDHI ELIASENYAS PRVLEAQGSV LTNKYAEGYP
GKRYYGGCEH VDEAERLAIE RAKQLFGADY ANVQPHSGSQ ANAAVYLALL QPGDTILGMS
LDHGGHLTHG AKVNFSGRLF NAVQYGVCPD TGELDYAQLE RLAKEHQPKM IIGGFSAYSR
VVDWQRLRDI ADSVGAYLLV DMAHVAGLVA AGVYPSPVQI ADVTTTTTHK TLRGPRGGLI
LARANAEVEK KLNSLVFPGT QGGPLMHAIA GKAVAFKEAL EPEFKAYQQQ VVANARAMAQ
GLIERGYKVV SGGTDNHLFL IDLVDKGLTG KAADAALGKA HITVNKNTVP NDPQSPFVTS
GLRIGTPAIT TRGFKEEECR ELAGWMADVL DDIENEDVIA RVREQVTQVC RRLPVYQQG
|
|---|
| |