| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0358 |
|---|
| Symbol | |
|---|
| ID | 4268949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 397779 |
|---|
| End bp | 399461 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638125089 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_741203 |
|---|
| Protein GI | 114319520 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0237962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.734928 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGG CTCGAACAGA CAAACCACAG CAGGGATCCA CCCAGTCGAA GGCGCGCCTT
TTTACCTCGC TGGCGGCGAT CACCACGGTG CTCACCGCGC TGGTGATCGG CCTGACCCTG
CACCTGCAGG CGGCCGACCG GGGGCAGCTG GCGGCCGGCC AGGGTCTCGA GGTGGAGCTG
CTGGAGCTTC GTGACCAGGC GGCGCGCGCC GGGCGCGGCG ACCCGGTGGA GGTGGCCCGG
CTGGAACAGG CGCTGGCCGA TGTCAGGGGC CATGCCGACA CCCTAACGTC GGTCGACCCG
GTGGCCGGAT ACGGCGCCCC GCCGGCGCTG GTGCAGGCCC GTCGCACGGT CAGCGAGGGC
CTGCCGGCGG TCACGTCGGC CGGCGAGCGG CTGTTGAGCC GGCTGGCTGG CGCCGCGGGC
CAGGAGGCGC CGGACTTGGC GGTGCGGGAG GTTGCCCGGG AGTTGCTCCG CACCAGTGAC
CAGCTCCGCG AGCCCGCCGG CGAACTCAGT ACCCGGTTGC GGCAACGGGC CGATGACCGC
TGGCTGCAGC CGGCGCTGGC GGGCGGACTG GGCGGCATCA CACTGATTCT GCTGGCCAGC
GCCGCGCTCT TCTCTACCCG GGTGTTCCGC GAGGTGCTGG CGGCCCGCGC CGAGGATAAG
CGACGGGTGG ACGAGGAGTC GCGGCGCAAC CAGGAGGCCA TCCTCAAGCT GCTCGACGAG
CTCGAGGACC TGCGCGAGGG GGACCTGCGC ACCCAGGCCT CCGTGGGCGA GGAGATCACC
GGCGCCATCG CCGACGCCTT CAACGACGCC ATCGACAACC TGCGCAGCCT GGTGGCCACC
ATCAACCGCA CCGCCGAGCA GGTCTCCGCC TCCGCCGAGC AGACCCAGGC CACCGCCACC
CGGCTCGCCG AGGCCTCCGG CCAGCAGGCC CAGCAGATCA GCAGCGCCTC CACCGCCATC
GAGGACATGG CCCAATCCAT CGACGAGGTC TCCCGCAACG CCGAGGAGTC GGCGCGGGTC
GCCCAGCAGG CGGTGAATAT CGCCACCAAG GGGGCGGAGA CGGTGCGGGC CACCATCGAG
GGCATGGACA CCATCCGCGA GCAGATCCAG GAGACCGCCA AACGCATCAA GCGCCTGGGT
GAGTCCTCCC AGGAGATCGG CAACATCGTC GAACTGATCA ACGACATCTC CGATCAGACC
AATATCCTCG CGCTCAACGC CTCCATCCAG GCCGCCATGG CCGGCGAGAC CGGGCGCGGG
TTCGCGGTGG TTGCGGACGA GGTGCAGCGC CTGGCCGAGC GCTCGGGCAA CGCCACCAAA
CAGATCGAGG CATTGGTCAA GACCATTCAG ACCGACACCA ACGAGGCGGT GCTGTCCATG
GAGCAGAGCA CCGCCGGGGT AGTGGAGGGG GCGCAGCTCG CCGAAAACGC CGGCGATGCC
CTGCGCGAGA TCGAATCCGT CTCCACTGAC CTGGCGGCGC TGATCCAGAG CATCTCCCGG
GCCTCCCGCC AGCAGGCCAA TGCCGCGGCC AACGTCTCGG ACACCATGAA GGTCATCCAG
GGGATCACCG ACGAGACCTC GGCGGGCACC CGGGAGACGG CCGACTCCAT CGGAAACCTC
ACGGCGCTGG CCAGCGATCT GCGCAGCTCC GTGGCCGGGT TCAAACTGCC GGACCATGAC
TGA
|
|---|
| Protein sequence | MTAARTDKPQ QGSTQSKARL FTSLAAITTV LTALVIGLTL HLQAADRGQL AAGQGLEVEL
LELRDQAARA GRGDPVEVAR LEQALADVRG HADTLTSVDP VAGYGAPPAL VQARRTVSEG
LPAVTSAGER LLSRLAGAAG QEAPDLAVRE VARELLRTSD QLREPAGELS TRLRQRADDR
WLQPALAGGL GGITLILLAS AALFSTRVFR EVLAARAEDK RRVDEESRRN QEAILKLLDE
LEDLREGDLR TQASVGEEIT GAIADAFNDA IDNLRSLVAT INRTAEQVSA SAEQTQATAT
RLAEASGQQA QQISSASTAI EDMAQSIDEV SRNAEESARV AQQAVNIATK GAETVRATIE
GMDTIREQIQ ETAKRIKRLG ESSQEIGNIV ELINDISDQT NILALNASIQ AAMAGETGRG
FAVVADEVQR LAERSGNATK QIEALVKTIQ TDTNEAVLSM EQSTAGVVEG AQLAENAGDA
LREIESVSTD LAALIQSISR ASRQQANAAA NVSDTMKVIQ GITDETSAGT RETADSIGNL
TALASDLRSS VAGFKLPDHD
|
|---|
| |