| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0309 |
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| Symbol | |
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| ID | 4270769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 350247 |
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| End bp | 351905 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638125035 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_741154 |
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| Protein GI | 114319471 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.670789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTAC AGGCGAAATC CGGATTGCTC AAGGGGATGA ACCCAACGGT CACCGTGGTG
ACGGTGGTGG TCATGCTGGT CTCGGTCATC CTCGGCGCCG GCTGGACGGA GCAATCCGCC
GCTGCCATCA GCACGGCGCG TGAGACCCTG AACCCCTTCC TGGAATGGTA CTACGTGGTG
CTGGTGGCGG TGTTCTTCGT CTTTTGCCTG TGGCTGGGCG TGGGCCGGTA CAAGAATGTG
CGCCTGGGTG GCGATACCGA GCGGCCGGAG TTCACCACCT TCTCCTGGGT GGCCATGCTG
TTTGCGGCCG GAACGGGGGT GGGGATCATC TTCTGGAGCA TCGCCGAGCC CATCATGCAC
TTCGACTCCA ACCCCTTCGC TGCCGACGGC AGCCCCGAGT CGGCGGCAGT GGCTATGCGC
CTGACCTTCT TTCACTGGGG GCTCCCGGGG TGGGCGATCT TCGGGCTGGT GGGGCTGGTG
CTGGCCTATT TCAGTTTCCG TCACAGCCTG CCGTTGACCG TCCGCTCGGC CCTCTACCCC
TTCCTGGGGC ACCGTATCCA CGGCCCGATC GGTGATCTGG TGGACAGCCT GGCGGTGTTC
GGCACGGTCT TCGGCATCGC GACGACCCTG GGGTTGGGGG TGCAGCAGAT GAACACCGGA
CTGGGCCAGC TCTTCGGACT GGACACCACG CTCACCCTGC AACTGGGGGT CACCGCGGTG
ATCATGTTCA TCGCCACGGC GTCGGTGGTC TCCGGGGTGA AGCGCGGGGT TCGGCTGCTC
TCCGAGGCCA ACTTCTGGCT GAGTGTGGTC ATTGTGCTCT TTTTCCTGAT CTTCGGCCCC
ACCCACTACC TGTTTGCGCT GACCATCGAG TCCACCGGCG AGTACCTGCA GAACCTGCTG
GCCATGACCT TCTACACCCA CGCCAACAAG GACACCGGCT GGCAGGCGGA GTGGACAGTC
TTCTTCTGGG GCTGGTGGAT TGCCTGGTCG CCCTTCGTGG GCATGTTCAT CGCCCGCATC
TCCCGCGGGC GCACGGTGCG CGAGTTCATG CTCGGGGTGC TGCTGATGCC CACGGTGATC
ACCTTCGTCT GGATCGGGCT GTTCGGCGGC ACCGCCCTGC ACCAGGAGCT GTTCGGCGAC
GGTGGCGTGG TTGCGGCGGT GAGTCAGGAT GTCTCGGTGG CCATCTTCCA CACCATCGAG
GGGATGCAAT TGGGCCTTCT GGGGCAGGCG GCGGGGGTGC TGGTCACGGT CCTGATCGCC
ACCTATCTGA TCACCTCCGC CAATGCCGGC ACCCTGGTCA TCAACACGCT CCTGGCCAAT
GGGGACACCG ATCCGCCCAC CGGGCACCGG ATCCTCTGGG GCGTGGTGCT GGCCCTGCTG
ACGGCGGTGC TCCTGGTGGC CGGTGGGCTG GAGACGCTGC AGGCGGCGGT CATTCTGGCG
GGGCTGCCCT TTTCGTTAGT GATGGTGGCG ATGCTGCTCG GTTTGGTGAA GGCCCTGGAG
CAGGAGCGCT ACGCACCGCG TCCCGGTGCC CGTACGCTGG CGCCGACCGA ACCCTGGGTG
GGCATGGACC AGGCCGGCGA TACCCTGCAC GAGCCCCGCG GCACGGCCGG GGCGGCCGGG
GAGTACCAGC CCAGTGCCCG GACCGGCGCC GAGGGCTAG
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| Protein sequence | MAVQAKSGLL KGMNPTVTVV TVVVMLVSVI LGAGWTEQSA AAISTARETL NPFLEWYYVV
LVAVFFVFCL WLGVGRYKNV RLGGDTERPE FTTFSWVAML FAAGTGVGII FWSIAEPIMH
FDSNPFAADG SPESAAVAMR LTFFHWGLPG WAIFGLVGLV LAYFSFRHSL PLTVRSALYP
FLGHRIHGPI GDLVDSLAVF GTVFGIATTL GLGVQQMNTG LGQLFGLDTT LTLQLGVTAV
IMFIATASVV SGVKRGVRLL SEANFWLSVV IVLFFLIFGP THYLFALTIE STGEYLQNLL
AMTFYTHANK DTGWQAEWTV FFWGWWIAWS PFVGMFIARI SRGRTVREFM LGVLLMPTVI
TFVWIGLFGG TALHQELFGD GGVVAAVSQD VSVAIFHTIE GMQLGLLGQA AGVLVTVLIA
TYLITSANAG TLVINTLLAN GDTDPPTGHR ILWGVVLALL TAVLLVAGGL ETLQAAVILA
GLPFSLVMVA MLLGLVKALE QERYAPRPGA RTLAPTEPWV GMDQAGDTLH EPRGTAGAAG
EYQPSARTGA EG
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