| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0294 |
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| Symbol | |
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| ID | 4269324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 337041 |
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| End bp | 338621 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638125020 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_741139 |
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| Protein GI | 114319456 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00647712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCA CGGTCTCCGA ACTGGACTAC GACAACCACA AGCCCCAGGG GTTTCTTGAC
CGCTGGGTCC TGACCACCAG TCACAAGGAC ATCGGCACCC TCTACCTGGT CTTCTCTCTG
ACCATGTTCT TTGTCGGTGG GGCCATGGCC ATGGTCATCC GCGCCGAGCT GTTTCAGCCC
GGCCTGAGCC TGGTGGACCC GCACTTTTTC AACCAGATGA CCACCATGCA CGCCCTGGTG
ATGATCTTCG GGGCGGTCAT GCCGGCCTTC GTGGGCTTGG CCAACTGGTT GATCCCGATG
CAGATCGGGG CGCCGGACAT GGCGCTGCCG CGGATGAACA ACTGGAGCTT CTGGCTGCTG
CCGTTCGCCT TCCTGATGTT GCTGGCAACC CTGATCATGC CCGGCGGCGG CCCCGCTTCG
GGGTGGACGC TCTACCCGCC CTTATCGCTG CAGACGGGCA TGGCCCTGCC CTTCCTGATC
TTCGCCATCC ACGTGGCCGG GCTGTCCTCC ATCATGGGCG CCATAAACAT CATCGTCACC
ATCCTCAACC TGCGGGCGCC GGGGATGACG CTGATGAAGA TGCCCCTGTT CGTCTGGACT
TGGCTGATCA CCGCCTTCCT GCTGATCGCG GTGATGCCGG TGCTGGCCGG TGCGGTGACC
ATGCTGCTCA CCGACGCCTA CTTCGGCACC AGCTTCTTCT CGGCCGCCGG CGGCGGTGAC
CCGGTAATGT ACCAGCACAT CTTCTGGTTC TTCGGGCACC CCGAGGTCTA CATCATGATC
CTGCCGGCCT TCGGCATCGT TTCGGCGATC ATCCCGGCCT TCGCCCGCAA GCCGCTGTTC
GGCTATGCCT CCATGGTCTA CGCGACCGCC GCCATCGCCT TCCTGTCGTT CATCGTCTGG
GCGCACCACA TGTTCACGGT GGGAATGCCC ACGGCCGGTG TGCTGTTCTT CATGTACGCC
ACCATGCTGA TCGCGGTGCC CACCGGGGTG AAGGTGTTCA ACTGGGTGGC CACCATGTGG
CGGGGCGCCA TGACCTTCGA GACCCCCATG CTGTTCAGCA TCGCCTTCGT GGTGCTGTTC
ACCATCGGCG GGCTCTCCGG GATCATGCTG GCCATCGCCC CGGCGGACTT CCAGTACCAC
GATACCTACT TTGTGGTGGC GCACTTCCAC TACGTGCTGG TCACCGGCTC GGTGTTTGCC
ATCTTCGCCG CCGTCTACTA CTGGATTCCC AAGTGGACGG GGGTGATGTA CGACGAGTTC
CTGGGCAAGG TGCACTTCTG GCTGTCGGTG GTCTCGGTGA ACGTGCTCTT CTTCCCGCAG
CACTTCCTGG GGCTGGCCGG CATGCCGCGG CGCACCGCCG ATTACGCCCT GCAGTTCGCC
GAGTGGAACA TGATCTCCTC CATCGGGGGC TTCGCCTTCG GCGTCAGCCA ACTGCTGTTC
CTGTATATCG TCATCAAGTG CATGCGCGGC CAGGGTGAGC CGGCCCCGGC CCGCTCCTGG
GAAGGGGCCG AGGGGCTGGA GTGGGAGCTG CCCTCGCCGG CCCCGCACCA CACGTTCTCC
AAGCCGCCGG TGATCAAATG A
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| Protein sequence | MSITVSELDY DNHKPQGFLD RWVLTTSHKD IGTLYLVFSL TMFFVGGAMA MVIRAELFQP
GLSLVDPHFF NQMTTMHALV MIFGAVMPAF VGLANWLIPM QIGAPDMALP RMNNWSFWLL
PFAFLMLLAT LIMPGGGPAS GWTLYPPLSL QTGMALPFLI FAIHVAGLSS IMGAINIIVT
ILNLRAPGMT LMKMPLFVWT WLITAFLLIA VMPVLAGAVT MLLTDAYFGT SFFSAAGGGD
PVMYQHIFWF FGHPEVYIMI LPAFGIVSAI IPAFARKPLF GYASMVYATA AIAFLSFIVW
AHHMFTVGMP TAGVLFFMYA TMLIAVPTGV KVFNWVATMW RGAMTFETPM LFSIAFVVLF
TIGGLSGIML AIAPADFQYH DTYFVVAHFH YVLVTGSVFA IFAAVYYWIP KWTGVMYDEF
LGKVHFWLSV VSVNVLFFPQ HFLGLAGMPR RTADYALQFA EWNMISSIGG FAFGVSQLLF
LYIVIKCMRG QGEPAPARSW EGAEGLEWEL PSPAPHHTFS KPPVIK
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