Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0262 |
Symbol | |
ID | 4268739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 296153 |
End bp | 297913 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638124987 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_741107 |
Protein GI | 114319424 |
COG category | [C] Energy production and conversion [T] Signal transduction mechanisms |
COG ID | [COG0538] Isocitrate dehydrogenases [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.141081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGC ACATCCAATA CCCCGAGAGC GGTGAGAAAA TCACAATAAA AGACGGCAAG CTCTCGGTGC CGGACAACCC CATCATCGGT TGTGTGGAAG GCGACGGCAT CGGCCCCGAC ATCACCCGCG CCTGCCTGCG CATATGGGAT GCTGCGGTGG AGCACGCCTA CAAGGGCAAG CGCAAGATCC ACTGGGCCGA GCTGTTCATG GGCGAGAAAG CCGCGGCGAA GTACGACGGC AACTACTTCC CCGACGAGAC CAAAGAAGCC CTCAAAGACC TGCTGATCTC CATCAAAGGC CCCCTGACCA CCCCGGTCGG CGGTGGCTTC CGCTCCCTCA ACGTCTCCCT GCGCCAGGAG CTGGACCTGT ACGCCTGTGT GCGCCCGGTG CGCCACTACG CCGGCGTGCC CTCGCCGCTG AAAAAGCCCG AGGACGTGGA CGTGGTGATC TTCCGTGAGA ACACCGAGGA CGTCTACGCC GGCCTGGAGT ACCAGAGCGG CAGCGACGAG AACAAAAAGC TCGCCAAGTT CCTGCGCGAG GAGATGGGCG CGGACTTCTT CGAGGACGCC GGCCTGGGCA TCAAGCCGAT CAGCGCCTAC GGCTCCAAGC GCCTGGTGCG CAAGGCCATT CAGTACGCCA TCGACAACAA CCGCGAATCG GTGACCCTGG TCCACAAGGG CAACATCATG AAGTTCACCG AAGGTGCCTT CCGCACCTGG GGTTACGAGG TGGCGCGCGA GGAGTTTGGC GACCAGACCA TCACCGAGGA GGAGCTCTAC TCCACCTATG GTGGTAAGCG CCCCGAGGGC AAGGTGGTCA TCAAGGACCG CATCGCCGAC ATCATCTTCC AGCTGCTGCA GCTCCGCCCG GCCGACTTCG ACGTGCTGGC CACCATGAAC CTCAACGGCG ACTACCTCTC CGACGCCGCC GCGGCCGAGG TGGGCGGCAT CGGCATCGCC CCGGGTGCCA ACATGGCGGA CCACGTGGCC GTGTTCGAGG CCACCCACGG CACCGCGCCC AAGTACGCCG GCCAGGACAA GGTCAACCCC GGCTCGCTGC TCTTCTCCGG CGTTATGCTG CTGGAGCACA TCGGCTGGCA GGAGGCCGCA GACCTGATCA CCGCCGCTTA CCAGGACGTG GTCACCGCCC GCATCGTCAC CTACGACTTC GCCCGCCAGC TCGAGGGCGC CACCGAGGTC AAGACCAGCC AGTTCGCCGA CGCCATCATC GACCAGATGC GCGGCAAGAT CGACGTGGCC AAGATCCGCC GCGAGCGTGA AGAGGCCGTC GAGCGCGAGC GCAAGGCCCG CGAGCAGCGC CGTGTGGTGG CCCCGCTGGA GGAGATGATC GCCTCCGGCC GCACGCCGCA CACCGTGGGC GACCTGATGA ACCCCAACCC GGTCACCGTA CCCGCCGAAA CCAGCGTCGA GGACGCCATG CACCTGATGC GCGAAAAGCG CATCTCCAGC GTGATCACCG AACCGGGCAC TGAGGGCGAG TGGGGTATCA TGACGCAACG CGATGTGCTC AGCCGCATCG TCTCCAAGAA CCGCACGCCG TCGACGGTGC AGGTTGAGGA GATCGCCAGC CGGCCGCTGG TCACCACCCC GGTGGACACC AGCCTGCACG ACTGCGCCGA GATCATGTCC GAGTCCAACA TCCGCCGTAT GGTGGTCATG GACAACAACA ACAAGCCGGT AGGCATCATC TCCGACACCG ACATCTTCGC CAGCGTGGAG CAGTTCGGTC TGCCGGAGTA A
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Protein sequence | MSQHIQYPES GEKITIKDGK LSVPDNPIIG CVEGDGIGPD ITRACLRIWD AAVEHAYKGK RKIHWAELFM GEKAAAKYDG NYFPDETKEA LKDLLISIKG PLTTPVGGGF RSLNVSLRQE LDLYACVRPV RHYAGVPSPL KKPEDVDVVI FRENTEDVYA GLEYQSGSDE NKKLAKFLRE EMGADFFEDA GLGIKPISAY GSKRLVRKAI QYAIDNNRES VTLVHKGNIM KFTEGAFRTW GYEVAREEFG DQTITEEELY STYGGKRPEG KVVIKDRIAD IIFQLLQLRP ADFDVLATMN LNGDYLSDAA AAEVGGIGIA PGANMADHVA VFEATHGTAP KYAGQDKVNP GSLLFSGVML LEHIGWQEAA DLITAAYQDV VTARIVTYDF ARQLEGATEV KTSQFADAII DQMRGKIDVA KIRREREEAV ERERKAREQR RVVAPLEEMI ASGRTPHTVG DLMNPNPVTV PAETSVEDAM HLMREKRISS VITEPGTEGE WGIMTQRDVL SRIVSKNRTP STVQVEEIAS RPLVTTPVDT SLHDCAEIMS ESNIRRMVVM DNNNKPVGII SDTDIFASVE QFGLPE
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