Gene Mlg_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0088 
Symbol 
ID4269916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp95778 
End bp96449 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID638124813 
ProductTetR family transcriptional regulator 
Protein accessionYP_740935 
Protein GI114319252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG AACCCCGTAT CAGCGGCGAC GACATCCTGG ACGCCGCCCT GGCTGAGGCC 
CGCGAGACCG GATGGGAGGC CATGCGTCTG GCCCCGGTGG CCCGCCGCCT GGGCGTGGGG
CTGCGGGCCG TGCAGCGGCA TTTCCGCGAG AAGGATGAAC TGATCGATGC CCGGCTGGAC
CGTGCCGATC GGGCGATGCT GGCGGTGATG GACACCCCGG GTTTTGCCGA TCTGCCGTCG
GTCACGCGCC TGCACCGCCT GCTCATGGCC TGGTTCGAGG ACCTGCAGTG CGACCGCTCG
GTGGTGCAAG GGATGCTGGC GCACAAGATG GAGTTCGGCC ATATCCACGT GCAATTCCCG
CTGTTGCTGC GGGTCAGCCG TACGGTGCAG TGGTGGCGCG AGGCGGCGGA CCGCTCCGGC
GTGCATCTGG AGCGGGCGCT GGAAGAGACA GCGCTGACCA CGTTGTTCCT GTCCACGGTG
GTGCGTTGGC TCCGCGACCG GGACCCCACC CTGGCGCCGA CGCGGCGCTT TCTGCAGCAG
GGGTTGGAGC GGCTGCGGGC CGTGCGCCAC GCGCTGCCTC CGGTCCCGGG GCTGGCCCGG
CCTGCGGGGG TGGCGCCCCG TCTGGCCCCG CCGGGCCCGG TGAGGGATGA CCCCGGGGAA
GAGGCCGGTT AA
 
Protein sequence
MTAEPRISGD DILDAALAEA RETGWEAMRL APVARRLGVG LRAVQRHFRE KDELIDARLD 
RADRAMLAVM DTPGFADLPS VTRLHRLLMA WFEDLQCDRS VVQGMLAHKM EFGHIHVQFP
LLLRVSRTVQ WWREAADRSG VHLERALEET ALTTLFLSTV VRWLRDRDPT LAPTRRFLQQ
GLERLRAVRH ALPPVPGLAR PAGVAPRLAP PGPVRDDPGE EAG