Gene Mlg_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0087 
Symbol 
ID4269915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp94226 
End bp95740 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content66% 
IMG OID638124812 
Productthreonine dehydratase 
Protein accessionYP_740934 
Protein GI114319251 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR01127] threonine dehydratase, medium form
[TIGR01124] threonine ammonia-lyase, biosynthetic, long form 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAT CCTATCTGGA GCGCATCCTC ACCGCCTGTG TCTACGACGT GGCCATACAG 
ACCCCGCTGG ACGACGGTGC CACCCTCTCC GAGCGCCTGG GCAACCGGGT GCTGATGAAG
CGAGAGGACC TGCAGCCGGT CTTTTCCTTC AAACTGCGTG GGGCCTACAA CAAGATCAAC
CGCCTTTCCG AGGAGGCGCG CCAGAAGGGC GTGATCTGTG CCTCGGCCGG CAACCACGCC
CAGGGTGTGG CGCTGTCGGC GAAGAAGCTG GGTATCAAGG CCACCATCGT CATGCCGCGC
ACCACGCCGG ACATCAAGGT GAACGCGGTC AAGCGGCTGG GCGGCCGGGT GGTGCTGCAC
GGCGACTCCT ACGACGAGGC CTCACAGCAT GCTAACAAGC TGGTCGAGGA GCGGGGGTTG
ACCTACATCC ACCCCTACGA CGACCCGGAC GTGATCGCCG GCCAGGGCAC GGTGGGCATG
GAGATCCTGC ACCAGCACCC GCGGGACATC CACGCCATCT TCATCGCCGT GGGTGGCGGG
GGCCTGGCCG CCGGTATCGG GGTGTATATC AAGCAGTTGC GCCCCGATAT CCGTATCATC
GCCGTGGAGC CGGACACCGC CCCTACCCTG GCCCGCAGCC TGGAGGTGGG CCGGCGGGTG
AAGCTGGAGC AGGTGGGGCT GTTCGCCGAC GGGGTGGCGG TGCGTCAGGT GGGCAAGACC
AACTGGCCGC TGTTGCGCCA GTATGTGGAT GACGTGGTGC TGGTCTCGGA TGATGAGATT
TGCGCGGCGA TCAAGGACAT CTTCGATGAC ACCCGCTCGA TCATGGAGCC GGCCGGGGCG
CTGGGGGTGG CGGGCTTGAA GAAATACGTG GAGCGCACCG GTATCCGCGA CAAGACCCTG
GTGGCGGTGA ACTGCGGCGC CAACATGAAC TTCTCGCGCC TGGGCCATGT GGCCGAGCGT
GCCGAGCTGG GTGAGCACCG TGAGGCGGTC TTCGCGGTCA CTATCCCAGA GCGGCCGGGG
AGCTTCAAAC AGTTCTGCGA GGCCATCGGC AAACGCGGTA TCACCGAGTT CAACTACCGC
TACGCGGACC CGACCCAGGC CCACGTCTAT GCCGGCATCC AGCTCAGCAG GGGCGATGAG
GAACGGGAGC TGCTGCGCGA GGAGCTGGAG GAGGCCGGCT ACCCGGTGCT GGACCTGACC
GAGGATGAGA TGGCCAAGGT GCACGTCCGC CACATGGTGG GCGGCCGTGG TGGCGGGGTG
GAGAACGAGA TCCTTTACCG CTTCGAGTTC CCGGAACGGC CCGGGGCGCT GCTCAAGTTC
CTCTCGCGGA TGGGTCGGCG CTGGAACATC TCGCTGTTCC ACTACCGCAA CCACGGGGCC
GCCTACGGCA AGGTGCTGGT GGGCATGCAG GTGCCGGAGG CCGAGCGCGG CCGCTGTGTG
GAATACCTGG ACAAACTGGG CTATCGCTAT GCAGAGGAGA CCGACAACCC GGCCTACCGG
TTGTTCCTGA GCTGA
 
Protein sequence
MSRSYLERIL TACVYDVAIQ TPLDDGATLS ERLGNRVLMK REDLQPVFSF KLRGAYNKIN 
RLSEEARQKG VICASAGNHA QGVALSAKKL GIKATIVMPR TTPDIKVNAV KRLGGRVVLH
GDSYDEASQH ANKLVEERGL TYIHPYDDPD VIAGQGTVGM EILHQHPRDI HAIFIAVGGG
GLAAGIGVYI KQLRPDIRII AVEPDTAPTL ARSLEVGRRV KLEQVGLFAD GVAVRQVGKT
NWPLLRQYVD DVVLVSDDEI CAAIKDIFDD TRSIMEPAGA LGVAGLKKYV ERTGIRDKTL
VAVNCGANMN FSRLGHVAER AELGEHREAV FAVTIPERPG SFKQFCEAIG KRGITEFNYR
YADPTQAHVY AGIQLSRGDE ERELLREELE EAGYPVLDLT EDEMAKVHVR HMVGGRGGGV
ENEILYRFEF PERPGALLKF LSRMGRRWNI SLFHYRNHGA AYGKVLVGMQ VPEAERGRCV
EYLDKLGYRY AEETDNPAYR LFLS