| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0061 |
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| Symbol | dapF |
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| ID | 4270339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 67016 |
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| End bp | 67855 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638124786 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_740908 |
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| Protein GI | 114319225 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCC GTTTCACCAA GATGCAGGGG CTGGGCAACG ACTTCGTGGT CATCGACGCT
GTGCGCCAGC CCGTCGAGCC CAGCCCGGAG CAGATCCGCC ACATCGCCGA CCGCCGTTAC
GGCGTCGGCT GCGACCAGGT CCTGCTGGCG ACACCGGCGC GGCGCAGCCA GGCCGATTTT
GGCTATCTCA TCTTCAACCC GGACGGCAGC CAGGCCGAGC ATTGCGGCAA CGGGGTGCGC
TGCCTGGCCC GCTTTCTCGA TGATCGCGGC CTGGTGCCCG CCGGCCGCCA CGAGTTGGTG
ATCGAGACGA TCAACGGCCT CTCCCGGGTG CGTCTGTGCG ACGACGGTCC GGTCACCGTG
GACATGGGGG CGCCGGTGCT GGAGCCACCC CACATCCCCT TCCGGGCGCC CAGCCGGGCG
CGGGAGTACG AGCTGGAGGT GGAGGGCCAG GTGGTGCGCC TGGGTGCGGT CTCCATGGGC
AATCCCCACG CCGTGCTGCG GGTGGATGAC GTGGACAGTG CGCCGGTGGA GACCTTGGGC
CCGGCCATCG AATCCCATTC CCGCTTTCCG CGCCGGGTCA ATGTCGGCTT CATGCAGGTG
CTCACCCCGA CCCACATCCG CCTGCGGGTC TACGAACGGG GCGCCGGTGA GACCCTGGCC
TGCGGCACCG GCGCCTGCGC CGCGGTCGTC TCCGGGCGGC TGCGCGGCTG GTTGGAGGAG
GCGGTGGACG TGGACCTGCC CGGCGGACGC CTCGTGATAC ACTGGGCCGG CGACGGTGAA
CACGTCTGGA TGACCGGCCC GGCGGAGACG GTATTCGAGG GGGAGATCCG TCTCGATTGA
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| Protein sequence | MKVRFTKMQG LGNDFVVIDA VRQPVEPSPE QIRHIADRRY GVGCDQVLLA TPARRSQADF
GYLIFNPDGS QAEHCGNGVR CLARFLDDRG LVPAGRHELV IETINGLSRV RLCDDGPVTV
DMGAPVLEPP HIPFRAPSRA REYELEVEGQ VVRLGAVSMG NPHAVLRVDD VDSAPVETLG
PAIESHSRFP RRVNVGFMQV LTPTHIRLRV YERGAGETLA CGTGACAAVV SGRLRGWLEE
AVDVDLPGGR LVIHWAGDGE HVWMTGPAET VFEGEIRLD
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