Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0058 |
Symbol | |
ID | 4270336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 65285 |
End bp | 65803 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638124783 |
Product | hypothetical protein |
Protein accession | YP_740905 |
Protein GI | 114319222 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACAC CTTGCTATGT CAGCATCCAG GGCCAGACCC AGGGCAACAT CACTGCCGGT GCCTTCACCC CCGACTCCGT GGGCAATATC TACGTCGAGG GCCATGAGGA CGAGATGCTC GTTCAGGAGG TCAAGCACGT GGTCACCGTG CCCACGGACC CCCAGTCGGG TCAGCCCTCG GGCCAGCGGG CGCACAAACC GCTGATCCTC ACGGTGGCGC TCAATAAGTC GGTGCCGCTG CTCTACAATG CCCTGGCCGC CGGCGAGATG CTGCCCGAGG TGGTACTGCG CTGGTATCGC ACCTCCACCG ACGGCAAGCA GGAGCATTTC TTCACCACCA CCCTCACCGA TGCCACCATC GTGGACATCG ACCTCACCAT GCCCCACGCC CAGGACACCG CCAAGGCCGA GTTCACCCAG CTCATGGACG TCAGCCTGGC CTACCGCAAG ATCGACTGGG AGCACACCGT CGCCGGCACC TCCGGTGCCG ACGACTGGCG CTCTCCGGTG GAGTCCTGA
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Protein sequence | MPTPCYVSIQ GQTQGNITAG AFTPDSVGNI YVEGHEDEML VQEVKHVVTV PTDPQSGQPS GQRAHKPLIL TVALNKSVPL LYNALAAGEM LPEVVLRWYR TSTDGKQEHF FTTTLTDATI VDIDLTMPHA QDTAKAEFTQ LMDVSLAYRK IDWEHTVAGT SGADDWRSPV ES
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