| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0054 |
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| Symbol | |
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| ID | 4270923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 57738 |
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| End bp | 59315 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638124779 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_740901 |
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| Protein GI | 114319218 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGCAG CGGGCCGGAG CGTGACAGAC GGGGATCACG GGCAGGCCCT CGGCGCGCTC
GCAGGGCTTG ACGCCGCCCT ACCGCTGGTG GAGAGCGAGG CCCCCGCGCA GCTCCGCCGG
CGCGCGTGCC GATTGCTTGC CCGCGCCCGG GGCCTGCCGC AGGTAGACTG CCTGGCGCTG
GATACCGATG GCCGGAGGCT GTCTGCAGGT GCCGGCAATG CGGCGTATCG GTGCGACGAC
TTCCGCCATC CCTACGCCCA CGTGATCCGC AGTGGGGCCC CCCTGCAGGC GTGCATCGGC
ACCCTGCGCG CCCGAATGGA TCATCCCGAC TTTCAGGCCG GGATGGCCGG CCTGAAAGGG
GACTGGGAAC TCCTCTGCCG CCCCTTGTGC GACCCGGATG CCCCGCGCGG CTGGCTGGGG
GTCTGGGCGC TGGTCGGTCC GCGGGAGGTG GTGGCTGCCC TGGACGGCGA TCCCGGCTTC
ATGGCCCTGG AAGGGCTCCT CTGCCGGTTG TGGTGCCGGT TGCTGACAGC GGCGAAGGCG
CACCGCCAGG GCCAGGATCT GCGCCACTCC CTGCAACGGT TGGGGCGGGA CACGCGAGCG
CATGCGCTGT CCGGCGCCTT GAGCCGCGAA TTGATTGGCA GCTCTCCGGC CATGTCCCGG
TTGCGCGATC AGGTGATCCG CGCGGCCGGC ACACGCCTGG CCGTCCTCCT GCAGGGCGAG
ACCGGGACCG GCAAGGAGCG TGTCGCCCGC GCGATTCACC GCCACTCGGC ACAGGGCGAT
GGGCCCTTCG TGGCGATCAA CTGTGCGGCG ATCCCGGAGA CGCTGCTGGA GTCCGAGCTC
TTCGGCCACG TGCGCGGCGC CCACTCCAGC GCCACCCGGG ATCGCACCGG TCTGCTGGCC
GCGGCCGACG GCGGCACCCT GTTCCTGGAC GAGATCGGCG ATATGCCGCC AGCCTTGCAG
GCCAAGCTGC TCCGGGTGCT GGAGAGTGGG TGGTACCGGC CGCTGGGTGG CGGACGCGAG
CGGCGTGCCG ACCTCCGGCT GGTGTCCGCC ACCCACCAAC CCTTGACGGC CCGCATCCGT
GAAGGCCGGT TTCGTGCCGA TCTCTATTAC CGACTGAACC AGTTTCCGCT TCGTCTGCCC
GCGCTGCGGG AACGCCGGGC GGACATCCCC GAACTGGCGG ATCATTTCGC GGCCGCCTAC
GCCGCCAGAG AGGGGCGCCC CCGGGCCAGC CTGAGTCCGA CGGCGCTGAC ACACCTGGCG
GCCCGGGACT TTCCCGGGAA CCTGCGGGAA CTGCGCAACC AGGTGGAGTA TGGCTGTGCC
ATGGCCCCGG CCGGTCAGCC CATCGGGCCG GCGGACCTGC CGCTGAGCGA GACCCGGGAA
CGGACGCCGG TGGAGGGCCT GCCGGGCCCG GCGTTCAATC TCCGGGAGGT GGTGCGTGAC
TACGAGGCCC GCCTCATCCG CGAAAAACTG CGCCAGTTCA ACGGCAACCG GGCCAAGACG
GCGGTCAGCC TGGGGCTCCC GAAGAGGACG CTGGCCCACA AGTGCCGGAA GCTGCAACTG
GATGAGGACC CGGCATGA
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| Protein sequence | MSAAGRSVTD GDHGQALGAL AGLDAALPLV ESEAPAQLRR RACRLLARAR GLPQVDCLAL
DTDGRRLSAG AGNAAYRCDD FRHPYAHVIR SGAPLQACIG TLRARMDHPD FQAGMAGLKG
DWELLCRPLC DPDAPRGWLG VWALVGPREV VAALDGDPGF MALEGLLCRL WCRLLTAAKA
HRQGQDLRHS LQRLGRDTRA HALSGALSRE LIGSSPAMSR LRDQVIRAAG TRLAVLLQGE
TGTGKERVAR AIHRHSAQGD GPFVAINCAA IPETLLESEL FGHVRGAHSS ATRDRTGLLA
AADGGTLFLD EIGDMPPALQ AKLLRVLESG WYRPLGGGRE RRADLRLVSA THQPLTARIR
EGRFRADLYY RLNQFPLRLP ALRERRADIP ELADHFAAAY AAREGRPRAS LSPTALTHLA
ARDFPGNLRE LRNQVEYGCA MAPAGQPIGP ADLPLSETRE RTPVEGLPGP AFNLREVVRD
YEARLIREKL RQFNGNRAKT AVSLGLPKRT LAHKCRKLQL DEDPA
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